RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 EEF1DP3Q658K8 133 aa16.04■□□□□ 0.16
UBXN11-213ENST00000472155 THNSL1Q8IYQ7 743 aa16.04■□□□□ 0.16
UBXN11-213ENST00000472155 NLRP4Q96MN2 994 aa16.04■□□□□ 0.16
UBXN11-213ENST00000472155 FHDC1Q9C0D6 1143 aaPredicted RBP16.04■□□□□ 0.16
UBXN11-213ENST00000472155 RAB17Q9H0T7 212 aa16.04■□□□□ 0.16
UBXN11-213ENST00000472155 SMIM23A6NLE4 172 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 H0YCG3 227 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 PPFIA2O75334 1257 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 MYZAPP0CAP1 466 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 CHRNA3P32297 505 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 ADCY2Q08462 1091 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 ORC1Q13415 861 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 PLCB4Q15147 1175 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 KDM7AQ6ZMT4 941 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 ENOSF1Q7L5Y1 443 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 SPATA33Q96N06 139 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 PWWP2AQ96N64 755 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 DNAJC17Q9NVM6 304 aaKnown RBP16.03■□□□□ 0.16
UBXN11-213ENST00000472155 PCYOX1Q9UHG3 505 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 NOVA2Q9UNW9 492 aaKnown RBP16.03■□□□□ 0.16
UBXN11-213ENST00000472155 BRD2P25440 801 aaKnown RBP16.03■□□□□ 0.16
UBXN11-213ENST00000472155 GJA5P36382 358 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 RFC5P40937 340 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 IGBP1P78318 339 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 PTP4A2Q12974 167 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 DHX34Q14147 1143 aaKnown RBP16.03■□□□□ 0.16
UBXN11-213ENST00000472155 SLFN12LQ6IEE8 588 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 ABRAQ8N0Z2 381 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 CDCA5Q96FF9 252 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 DDX27Q96GQ7 796 aaKnown RBP16.03■□□□□ 0.16
UBXN11-213ENST00000472155 ACO2Q99798 780 aaKnown RBP16.03■□□□□ 0.16
UBXN11-213ENST00000472155 RNPEPQ9H4A4 650 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 AZI2Q9H6S1 392 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 EFCC1Q9HA90 598 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 ADAM22Q9P0K1 906 aa16.03■□□□□ 0.16
UBXN11-213ENST00000472155 RRP15Q9Y3B9 282 aaKnown RBP16.03■□□□□ 0.16
UBXN11-213ENST00000472155 CAND2O75155 1236 aa16.02■□□□□ 0.16
UBXN11-213ENST00000472155 PRKCBP05771 671 aa16.02■□□□□ 0.16
UBXN11-213ENST00000472155 MAMLD1Q13495 774 aa16.02■□□□□ 0.16
UBXN11-213ENST00000472155 CELF3Q5SZQ8 465 aaKnown RBP16.02■□□□□ 0.16
UBXN11-213ENST00000472155 EFCAB13Q8IY85 973 aa16.02■□□□□ 0.16
UBXN11-213ENST00000472155 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.02■□□□□ 0.16
UBXN11-213ENST00000472155 ACSF2Q96CM8 615 aaPredicted RBP16.02■□□□□ 0.16
UBXN11-213ENST00000472155 OPTNQ96CV9 577 aa16.02■□□□□ 0.16
UBXN11-213ENST00000472155 TMEM134Q9H6X4 195 aa16.02■□□□□ 0.16
UBXN11-213ENST00000472155 TJP2Q9UDY2 1190 aa16.02■□□□□ 0.16
UBXN11-213ENST00000472155 FAM187AA6NFU0 413 aa16.02■□□□□ 0.15
UBXN11-213ENST00000472155 NOP56O00567 594 aaKnown RBP16.02■□□□□ 0.15
UBXN11-213ENST00000472155 VPS41P49754 854 aa16.02■□□□□ 0.15
UBXN11-213ENST00000472155 SLC29A2Q14542 456 aa16.02■□□□□ 0.15
UBXN11-213ENST00000472155 KRT71Q3SY84 523 aa16.02■□□□□ 0.15
UBXN11-213ENST00000472155 FAM160B1Q5W0V3 765 aa16.02■□□□□ 0.15
UBXN11-213ENST00000472155 LRIG3Q6UXM1 1119 aa16.02■□□□□ 0.15
UBXN11-213ENST00000472155 SRLQ86TD4 932 aa16.02■□□□□ 0.15
UBXN11-213ENST00000472155 BRSK2Q8IWQ3 736 aa16.02■□□□□ 0.15
UBXN11-213ENST00000472155 PPP1R13LQ8WUF5 828 aa16.02■□□□□ 0.15
UBXN11-213ENST00000472155 ZNF606Q8WXB4 792 aa16.02■□□□□ 0.15
UBXN11-213ENST00000472155 PI4K2BG5E9Z4 385 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 ECM2O94769 699 aaPredicted RBP16.01■□□□□ 0.15
UBXN11-213ENST00000472155 IVLP07476 585 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 LSP1P33241 339 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 RAP1GAPP47736 663 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 IREB2P48200 963 aaKnown RBP16.01■□□□□ 0.15
UBXN11-213ENST00000472155 TFAMQ00059 246 aaKnown RBP16.01■□□□□ 0.15
UBXN11-213ENST00000472155 CYP1B1Q16678 543 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 ERO1BQ86YB8 467 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 TFAP2BQ92481 460 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 MEFVO15553 781 aaPredicted RBP16.01■□□□□ 0.15
UBXN11-213ENST00000472155 TOM1L1O75674 476 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 RALAP11233 206 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 YBX3P16989 372 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBXN11-213ENST00000472155 SSR1P43307 286 aaKnown RBP16.01■□□□□ 0.15
UBXN11-213ENST00000472155 PSMC4P43686 418 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 MAGOHP61326 146 aaKnown RBP16.01■□□□□ 0.15
UBXN11-213ENST00000472155 MKRN3Q13064 507 aaKnown RBP16.01■□□□□ 0.15
UBXN11-213ENST00000472155 SGO2Q562F6 1265 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 GPAT2Q6NUI2 795 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 CCDC25Q86WR0 208 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
UBXN11-213ENST00000472155 MDM1Q8TC05 714 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 FAM107BQ9H098 131 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 POLIQ9UNA4 740 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 AGTPBP1Q9UPW5 1226 aa16.01■□□□□ 0.15
UBXN11-213ENST00000472155 SPDYE5A6NIY4 337 aa16■□□□□ 0.15
UBXN11-213ENST00000472155 HMGB1P1B2RPK0 211 aaPredicted RBP16■□□□□ 0.15
UBXN11-213ENST00000472155 INO80B-WBP1J3KQ70 363 aa16■□□□□ 0.15
UBXN11-213ENST00000472155 FSCN2O14926 492 aa16■□□□□ 0.15
UBXN11-213ENST00000472155 LDHAP00338 332 aaKnown RBP16■□□□□ 0.15
UBXN11-213ENST00000472155 ASS1P00966 412 aaKnown RBP16■□□□□ 0.15
UBXN11-213ENST00000472155 PMS2P54278 862 aa16■□□□□ 0.15
UBXN11-213ENST00000472155 TXNRD3NBQ6F5E7 133 aa16■□□□□ 0.15
UBXN11-213ENST00000472155 CCDC62Q6P9F0 684 aa16■□□□□ 0.15
UBXN11-213ENST00000472155 C1orf131Q8NDD1 294 aaKnown RBP16■□□□□ 0.15
UBXN11-213ENST00000472155 MMP19Q99542 508 aa16■□□□□ 0.15
UBXN11-213ENST00000472155 INO80BQ9C086 356 aaPredicted RBP16■□□□□ 0.15
UBXN11-213ENST00000472155 AVENQ9NQS1 362 aaPredicted RBP16■□□□□ 0.15
UBXN11-213ENST00000472155 DNAJC25-GNG10A0A024R161 153 aa16■□□□□ 0.15
UBXN11-213ENST00000472155 TLDC2A0PJX2 215 aa16■□□□□ 0.15
UBXN11-213ENST00000472155 FOXO6A8MYZ6 492 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms