RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PPP2R3AQ06190 1150 aa12.54□□□□□ -0.4
COL4A3-205ENST00000471862 GET4Q7L5D6 327 aaPredicted RBP12.54□□□□□ -0.4
COL4A3-205ENST00000471862 ZNF461Q8TAF7 563 aa12.54□□□□□ -0.4
COL4A3-205ENST00000471862 RSAD2Q8WXG1 361 aa12.54□□□□□ -0.4
COL4A3-205ENST00000471862 HVCN1Q96D96 273 aa12.54□□□□□ -0.4
COL4A3-205ENST00000471862 TSPAN18Q96SJ8 248 aa12.54□□□□□ -0.4
COL4A3-205ENST00000471862 IKZF4Q9H2S9 585 aa12.54□□□□□ -0.4
COL4A3-205ENST00000471862 RPF1Q9H9Y2 349 aaKnown RBP12.54□□□□□ -0.4
COL4A3-205ENST00000471862 FBXL5Q9UKA1 691 aa12.54□□□□□ -0.4
COL4A3-205ENST00000471862 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
COL4A3-205ENST00000471862 PIEZO1Q92508 2521 aa12.54□□□□□ -0.4
COL4A3-205ENST00000471862 H7C4K7 107 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 NARSO43776 548 aaKnown RBP12.53□□□□□ -0.4
COL4A3-205ENST00000471862 PPP6R2O75170 966 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 XYLBO75191 536 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 ATF2P15336 505 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 FSHRP23945 695 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 GUCY2FP51841 1108 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 TCF15Q12870 199 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 HTR4Q13639 388 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 SPATA1Q5VX52 437 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 CCDC73Q6ZRK6 1079 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 SV2BQ7L1I2 683 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 CD302Q8IX05 232 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 SLC44A3Q8N4M1 653 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 PRRX2Q99811 253 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 MSTO1Q9BUK6 570 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 HCFC1R1Q9NWW0 138 aa12.53□□□□□ -0.4
COL4A3-205ENST00000471862 DNMT3BQ9UBC3 853 aaKnown RBP12.53□□□□□ -0.4
COL4A3-205ENST00000471862 ZFP37Q9Y6Q3 630 aaPredicted RBP12.53□□□□□ -0.4
COL4A3-205ENST00000471862 PPEF2O14830 753 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 SPTLC2O15270 562 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 XPOTO43592 962 aaKnown RBP12.52□□□□□ -0.41
COL4A3-205ENST00000471862 SEC24AO95486 1093 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 YEATS4O95619 227 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 NPR3P17342 541 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 GAP43P17677 238 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 ADSSP30520 456 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 STAT6P42226 847 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 NUBP1P53384 320 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 POU5F1Q01860 360 aaKnown RBP12.52□□□□□ -0.41
COL4A3-205ENST00000471862 STK38Q15208 465 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 E2F4Q16254 413 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 CTXN3Q4LDR2 81 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 CWF19L1Q69YN2 538 aaKnown RBP12.52□□□□□ -0.41
COL4A3-205ENST00000471862 JADE1Q6IE81 842 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 SLFN12LQ6IEE8 588 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 ZNF280DQ6N043 979 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 CRELD2Q6UXH1 353 aaPredicted RBP12.52□□□□□ -0.41
COL4A3-205ENST00000471862 TCEAL8Q8IYN2 117 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 TMEM105Q8N8V8 129 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 APPL2Q8NEU8 664 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 ITFG1Q8TB96 612 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 ASB7Q9H672 318 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.41
COL4A3-205ENST00000471862 AGO2Q9UKV8 859 aaKnown RBP12.52□□□□□ -0.41
COL4A3-205ENST00000471862 CDH7Q9ULB5 785 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 DERAQ9Y315 318 aa12.52□□□□□ -0.41
COL4A3-205ENST00000471862 ANO9A1A5B4 782 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 OAZ2O95190 189 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 NFICP08651 508 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 SRFP11831 508 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 ACOT2P49753 483 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 CASP5P51878 434 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 PTPN5P54829 565 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 KCNA1Q09470 495 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 L1TD1Q5T7N2 865 aaKnown RBP12.51□□□□□ -0.41
COL4A3-205ENST00000471862 TPGS2Q68CL5 300 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 ADALQ6DHV7 355 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 HSCBQ8IWL3 235 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 BEST2Q8NFU1 509 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 FGF13Q92913 245 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
COL4A3-205ENST00000471862 FGFBP2Q9BYJ0 223 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 PANK2Q9BZ23 570 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 MRPL44Q9H9J2 332 aaKnown RBP12.51□□□□□ -0.41
COL4A3-205ENST00000471862 KBTBD4Q9NVX7 518 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 TFIP11Q9UBB9 837 aaKnown RBP12.51□□□□□ -0.41
COL4A3-205ENST00000471862 WNT16Q9UBV4 365 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 AFF4Q9UHB7 1163 aaKnown RBP12.51□□□□□ -0.41
COL4A3-205ENST00000471862 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 POLIQ9UNA4 740 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 NUMBLQ9Y6R0 609 aa12.51□□□□□ -0.41
COL4A3-205ENST00000471862 TCHHQ07283 1943 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 KRBA1A5PL33 1030 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 PIRO00625 290 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 SPTLC1O15269 473 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 VNN2O95498 520 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 F13A1P00488 732 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 RHOP08100 348 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 ZSCAN22P10073 491 aaPredicted RBP12.5□□□□□ -0.41
COL4A3-205ENST00000471862 PDIA4P13667 645 aaKnown RBP12.5□□□□□ -0.41
COL4A3-205ENST00000471862 TYMPP19971 482 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 PAX3P23760 479 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 ELF1P32519 619 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 CLCN5P51795 746 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 ARPP19P56211 112 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 LILRA4P59901 499 aa12.5□□□□□ -0.41
COL4A3-205ENST00000471862 YWHAHQ04917 246 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms