RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 TXLNGYQ9BZA5 131 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 ZDHHC18Q9NUE0 388 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 NUB1Q9Y5A7 615 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 OGTO15294 1046 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 PRKCBP05771 671 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 CYP2C8P10632 490 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 RRM1P23921 792 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 NOMO3P69849 1222 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 CEP85LQ5SZL2 805 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 LIN9Q5TKA1 542 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 TMEM270Q6UE05 265 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 KDM7AQ6ZMT4 941 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 PHF13Q86YI8 300 aaPredicted RBP19.86■□□□□ 0.77
COL20A1-205ENST00000471582 ZDHHC14Q8IZN3 488 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 UBR7Q8N806 425 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 RBBP8NLQ8NC74 664 aaPredicted RBP19.86■□□□□ 0.77
COL20A1-205ENST00000471582 GPRC5AQ8NFJ5 357 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 CPA5Q8WXQ8 436 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 C18orf8Q96DM3 657 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 R3HDMLQ9H3Y0 253 aa19.86■□□□□ 0.77
COL20A1-205ENST00000471582 CCL15-CCL14A0A0B4J2E2 113 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 PDHXO00330 501 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 ITGBL1O95965 494 aaPredicted RBP19.85■□□□□ 0.77
COL20A1-205ENST00000471582 ASS1P00966 412 aaKnown RBP19.85■□□□□ 0.77
COL20A1-205ENST00000471582 CALCAP01258 141 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 ZNF132P52740 706 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 PTP4A2Q12974 167 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 PLCB4Q15147 1175 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 SIX1Q15475 284 aaPredicted RBP19.85■□□□□ 0.77
COL20A1-205ENST00000471582 CCL15Q16663 113 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 CCDC137Q6PK04 289 aaKnown RBP19.85■□□□□ 0.77
COL20A1-205ENST00000471582 DHX37Q8IY37 1157 aaKnown RBP19.85■□□□□ 0.77
COL20A1-205ENST00000471582 CYFIP2Q96F07 1278 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 FAM129AQ9BZQ8 928 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 SMARCAD1Q9H4L7 1026 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 TMBIM4Q9HC24 238 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 PARP2Q9UGN5 583 aa19.85■□□□□ 0.77
COL20A1-205ENST00000471582 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL20A1-205ENST00000471582 MYO1FO00160 1098 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 ABLIM1O14639 778 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 FSCN2O14926 492 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 MYZAPP0CAP1 466 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 MARK3P27448 753 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 FLT3P36888 993 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 IRAK1P51617 712 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 C1QBPQ07021 282 aaKnown RBP19.84■□□□□ 0.77
COL20A1-205ENST00000471582 DHX9Q08211 1270 aaKnown RBP19.84■□□□□ 0.77
COL20A1-205ENST00000471582 TFDP1Q14186 410 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 TTC27Q6P3X3 843 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 RUFY4Q6ZNE9 571 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 TRIM50Q86XT4 487 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 CPNE8Q86YQ8 564 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 RNF149Q8NC42 400 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 MAIP1Q8WWC4 291 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 SLCO2A1Q92959 643 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 SPATA33Q96N06 139 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 LRRC19Q9H756 370 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 MRPL47Q9HD33 250 aaKnown RBP19.84■□□□□ 0.77
COL20A1-205ENST00000471582 CPSF3Q9UKF6 684 aaKnown RBP19.84■□□□□ 0.77
COL20A1-205ENST00000471582 TRPM7Q96QT4 1865 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 TTLL13PA6NNM8 815 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 HARSP12081 509 aaKnown RBP19.84■□□□□ 0.77
COL20A1-205ENST00000471582 PROZP22891 400 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 COILP38432 576 aaPredicted RBP19.84■□□□□ 0.77
COL20A1-205ENST00000471582 SPRYD7Q5W111 196 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 CST9Q5W186 159 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 TSHZ1Q6ZSZ6 1077 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 TCHPQ9BT92 498 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 TRIM31Q9BZY9 425 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 SCINQ9Y6U3 715 aa19.84■□□□□ 0.77
COL20A1-205ENST00000471582 ASB14A6NK59 587 aa19.83■□□□□ 0.77
COL20A1-205ENST00000471582 PPFIA4O75335 1185 aa19.83■□□□□ 0.77
COL20A1-205ENST00000471582 PROSCO94903 275 aa19.83■□□□□ 0.77
COL20A1-205ENST00000471582 SRGAP2CP0DJJ0 459 aa19.83■□□□□ 0.77
COL20A1-205ENST00000471582 RARAP10276 462 aa19.83■□□□□ 0.77
COL20A1-205ENST00000471582 TNFSF9P41273 254 aa19.83■□□□□ 0.77
COL20A1-205ENST00000471582 GCLCP48506 637 aaPredicted RBP19.83■□□□□ 0.77
COL20A1-205ENST00000471582 ZNF844Q08AG5 666 aa19.83■□□□□ 0.77
COL20A1-205ENST00000471582 DUOXA2Q1HG44 320 aa19.83■□□□□ 0.77
COL20A1-205ENST00000471582 KCTD16Q68DU8 428 aa19.83■□□□□ 0.77
COL20A1-205ENST00000471582 ANKRD23Q86SG2 305 aa19.83■□□□□ 0.77
COL20A1-205ENST00000471582 FBXO16Q8IX29 292 aaPredicted RBP19.83■□□□□ 0.77
COL20A1-205ENST00000471582 UBLCP1Q8WVY7 318 aaPredicted RBP19.83■□□□□ 0.77
COL20A1-205ENST00000471582 UMODL1Q5DID0 1318 aa19.83■□□□□ 0.76
COL20A1-205ENST00000471582 ACKR2O00590 384 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 EIF3HO15372 352 aaKnown RBP eCLIP19.82■□□□□ 0.76
COL20A1-205ENST00000471582 HBP1O60381 514 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 EIF3BP55884 814 aaKnown RBP19.82■□□□□ 0.76
COL20A1-205ENST00000471582 SEZ6Q53EL9 994 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 PLEKHA7Q6IQ23 1121 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 MPZL3Q6UWV2 235 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 ZDHHC24Q6UX98 284 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 SH2D3CQ8N5H7 860 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 FZD8Q9H461 694 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 EFCC1Q9HA90 598 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 GRHL1Q9NZI5 618 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 ADAM22Q9P0K1 906 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 GRIN2DO15399 1336 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 MCM3APO60318 1980 aa19.82■□□□□ 0.76
COL20A1-205ENST00000471582 TCRBV7S2A1N4TA0A589 114 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms