RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 OLFML1Q6UWY5 402 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 GPR149Q86SP6 731 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 PNMA8AQ86V59 439 aaPredicted RBP7.34□□□□□ -1.23
CCDC39-202ENST00000471307 COLGALT2Q8IYK4 626 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 DCBLD1Q8N8Z6 715 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 IL17RDQ8NFM7 739 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 COA7Q96BR5 231 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 BRINP2Q9C0B6 783 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 CCDC8Q9H0W5 538 aaPredicted RBP7.34□□□□□ -1.23
CCDC39-202ENST00000471307 PCDH12Q9NPG4 1184 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 TBCCD1Q9NVR7 557 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 LIMCH1Q9UPQ0 1083 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 MTO1Q9Y2Z2 717 aaKnown RBP7.34□□□□□ -1.23
CCDC39-202ENST00000471307 COL4A3BPQ9Y5P4 624 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 WASHC2CQ9Y4E1 1318 aa7.33□□□□□ -1.24
CCDC39-202ENST00000471307 KIF23Q02241 960 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-202ENST00000471307 PCBP2Q15366 365 aaKnown RBP eCLIP7.33□□□□□ -1.24
CCDC39-202ENST00000471307 CYP2A13Q16696 494 aa7.33□□□□□ -1.24
CCDC39-202ENST00000471307 MARS2Q96GW9 593 aaKnown RBP7.33□□□□□ -1.24
CCDC39-202ENST00000471307 MRGPRX4Q96LA9 322 aa7.33□□□□□ -1.24
CCDC39-202ENST00000471307 TESQ9UGI8 421 aaKnown RBP7.33□□□□□ -1.24
CCDC39-202ENST00000471307 USP25Q9UHP3 1055 aa7.33□□□□□ -1.24
CCDC39-202ENST00000471307 PCDHA13Q9Y5I0 950 aa7.33□□□□□ -1.24
CCDC39-202ENST00000471307 CFAP20Q9Y6A4 193 aaKnown RBP7.33□□□□□ -1.24
CCDC39-202ENST00000471307 AATKQ6ZMQ8 1374 aa7.33□□□□□ -1.24
CCDC39-202ENST00000471307 CCDC154A6NI56 674 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 ZAR1LA6NP61 321 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 GRM6O15303 877 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 ERN1O75460 977 aaKnown RBP7.32□□□□□ -1.24
CCDC39-202ENST00000471307 TYRP1P17643 537 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 EDNRBP24530 442 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 VAV2P52735 878 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 NOMO3P69849 1222 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 SLFN5Q08AF3 891 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 FAM50AQ14320 339 aaKnown RBP7.32□□□□□ -1.24
CCDC39-202ENST00000471307 NOMO2Q5JPE7 1267 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 PRIMA1Q86XR5 153 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 TBC1D15Q8TC07 691 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 RIOX1Q9H6W3 641 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 MAN1C1Q9NR34 630 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 JKAMPQ9P055 326 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 ZNHIT2Q9UHR6 403 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 NEU2Q9Y3R4 380 aa7.32□□□□□ -1.24
CCDC39-202ENST00000471307 FOXI1Q12951 378 aa7.31□□□□□ -1.24
CCDC39-202ENST00000471307 PTPN21Q16825 1174 aa7.31□□□□□ -1.24
CCDC39-202ENST00000471307 TTC7BQ86TV6 843 aa7.31□□□□□ -1.24
CCDC39-202ENST00000471307 ZNF575Q86XF7 245 aa7.31□□□□□ -1.24
CCDC39-202ENST00000471307 NACC2Q96BF6 587 aa7.31□□□□□ -1.24
CCDC39-202ENST00000471307 SYNPO2LQ9H987 977 aa7.31□□□□□ -1.24
CCDC39-202ENST00000471307 CCDC88BA6NC98 1476 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 TNKSO95271 1327 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 CCDC78A2IDD5 438 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 NUDT3O95989 172 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 MPLP40238 635 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 TLE1Q04724 770 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 IL10RAQ13651 578 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 C3orf36Q3SXR2 165 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 STRIP1Q5VSL9 837 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 SP5Q6BEB4 398 aaPredicted RBP7.3□□□□□ -1.24
CCDC39-202ENST00000471307 GADL1Q6ZQY3 521 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 LNX2Q8N448 690 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 AOPEPQ8N6M6 819 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 CLPTM1LQ96KA5 538 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 PACSIN1Q9BY11 444 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 UNKLQ9H9P5 680 aaKnown RBP7.3□□□□□ -1.24
CCDC39-202ENST00000471307 HSFX1Q9UBD0 423 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 DMTF1Q9Y222 760 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 PCDHB1Q9Y5F3 818 aa7.3□□□□□ -1.24
CCDC39-202ENST00000471307 SLC43A1O75387 559 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 ANXA1P04083 346 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 FCER1AP12319 257 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 CCND1P24385 295 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 SLC6A4P31645 630 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 RECQLP46063 649 aaPredicted RBP7.29□□□□□ -1.24
CCDC39-202ENST00000471307 PRR16Q569H4 304 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 Q6ZNX1 250 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 ZNF365Q70YC5 407 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 SLC44A3Q8N4M1 653 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 NSUN6Q8TEA1 469 aaKnown RBP7.29□□□□□ -1.24
CCDC39-202ENST00000471307 Q96MF0 132 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 ASPSCR1Q9BZE9 553 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 CASS4Q9NQ75 786 aa7.29□□□□□ -1.24
CCDC39-202ENST00000471307 A0A1W2PS29 197 aa7.28□□□□□ -1.24
CCDC39-202ENST00000471307 AGFG2O95081 481 aa7.28□□□□□ -1.24
CCDC39-202ENST00000471307 CD1AP06126 327 aa7.28□□□□□ -1.24
CCDC39-202ENST00000471307 UAP1L1Q3KQV9 507 aa7.28□□□□□ -1.24
CCDC39-202ENST00000471307 UTP14CQ5TAP6 766 aaKnown RBP7.28□□□□□ -1.24
CCDC39-202ENST00000471307 MIER2Q8N344 545 aa7.28□□□□□ -1.24
CCDC39-202ENST00000471307 Q8NA96 180 aa7.28□□□□□ -1.24
CCDC39-202ENST00000471307 RAB24Q969Q5 203 aa7.28□□□□□ -1.24
CCDC39-202ENST00000471307 PTCD3Q96EY7 689 aaKnown RBP7.28□□□□□ -1.24
CCDC39-202ENST00000471307 DMRTA2Q96SC8 542 aa7.28□□□□□ -1.24
CCDC39-202ENST00000471307 SIDT1Q9NXL6 827 aaKnown RBP7.28□□□□□ -1.24
CCDC39-202ENST00000471307 INSL6Q9Y581 213 aa7.28□□□□□ -1.24
CCDC39-202ENST00000471307 KCNA2P16389 499 aa7.27□□□□□ -1.25
CCDC39-202ENST00000471307 CXCR5P32302 372 aa7.27□□□□□ -1.25
CCDC39-202ENST00000471307 EVA1CP58658 441 aa7.27□□□□□ -1.25
CCDC39-202ENST00000471307 ZNF280AP59817 542 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-202ENST00000471307 ZNF844Q08AG5 666 aa7.27□□□□□ -1.25
CCDC39-202ENST00000471307 ODF1Q14990 250 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms