RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RNF181Q9P0P0 153 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 TESQ9UGI8 421 aaKnown RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 SAP30BPQ9UHR5 308 aaKnown RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 ZNHIT2Q9UHR6 403 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 INTUQ9ULD6 942 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 NOX1Q9Y5S8 564 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 EPN1Q9Y6I3 576 aaPredicted RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 SALL3Q9BXA9 1300 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 TCRBV7S2A1N4TA0A589 114 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 ZAR1LA6NP61 321 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 KRTAP9-6A8MVA2 160 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 KIAA0355O15063 1070 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 SGTAO43765 313 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 PCDHGA12O60330 932 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 KATNA1O75449 491 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 ERN1O75460 977 aaKnown RBP1.95□□□□□ -2.1
UBXN4-207ENST00000471246 ZFPL1O95159 310 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 CD1AP06126 327 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 SLC6A4P31645 630 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 PLA2G5P39877 138 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 WASP42768 502 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 CLK3P49761 638 aaKnown RBP1.95□□□□□ -2.1
UBXN4-207ENST00000471246 GUCY2FP51841 1108 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 VAV2P52735 878 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 CTXN1P60606 82 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 CDC42EP1Q00587 391 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 CREMQ03060 361 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 MPP3Q13368 585 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 FAM50AQ14320 339 aaKnown RBP1.95□□□□□ -2.1
UBXN4-207ENST00000471246 CYP2A13Q16696 494 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 GEN1Q17RS7 908 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 C3orf36Q3SXR2 165 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 PGM2L1Q6PCE3 622 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 FOXR2Q6PJQ5 311 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 RSPH3Q86UC2 560 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 ADGRG3Q86Y34 549 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 FITM2Q8N6M3 262 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 TBC1D15Q8TC07 691 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 IFI44Q8TCB0 444 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 SSH3Q8TE77 659 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 SCARB1Q8WTV0 552 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 NUP133Q8WUM0 1156 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 KAT5Q92993 513 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 HDAC10Q969S8 669 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 FUBP1Q96AE4 644 aaKnown RBP1.95□□□□□ -2.1
UBXN4-207ENST00000471246 NACC2Q96BF6 587 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 MARS2Q96GW9 593 aaKnown RBP1.95□□□□□ -2.1
UBXN4-207ENST00000471246 TEKT5Q96M29 485 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 Q96MF0 132 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 TLR10Q9BXR5 811 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 CCDC8Q9H0W5 538 aaPredicted RBP1.95□□□□□ -2.1
UBXN4-207ENST00000471246 R3HDMLQ9H3Y0 253 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 GSTO2Q9H4Y5 243 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 SYNPO2LQ9H987 977 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 UNKLQ9H9P5 680 aaKnown RBP1.95□□□□□ -2.1
UBXN4-207ENST00000471246 TMEM74BQ9NUR3 256 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 TDP1Q9NUW8 608 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 TBCCD1Q9NVR7 557 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 HSFX1Q9UBD0 423 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 CDYLQ9Y232 598 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 MTO1Q9Y2Z2 717 aaKnown RBP1.95□□□□□ -2.1
UBXN4-207ENST00000471246 PCDHGA9Q9Y5G4 932 aaKnown RBP1.95□□□□□ -2.1
UBXN4-207ENST00000471246 PCDHGA8Q9Y5G5 932 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 PCDHGA7Q9Y5G6 932 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 PCDHGA6Q9Y5G7 932 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 PCDHGA3Q9Y5H0 932 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 PCDHA13Q9Y5I0 950 aa1.95□□□□□ -2.1
UBXN4-207ENST00000471246 MAST3O60307 1309 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 SHTN1A0MZ66 631 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 KLHL33A6NCF5 533 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 CCDC154A6NI56 674 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 GABRDO14764 452 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 MGST3O14880 152 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 GRM6O15303 877 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 HTRA2O43464 458 aaPredicted RBP1.94□□□□□ -2.1
UBXN4-207ENST00000471246 ESRRBO95718 433 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 SBK3P0C264 359 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 CKBP12277 381 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 CDK11BP21127 795 aaKnown RBP1.94□□□□□ -2.1
UBXN4-207ENST00000471246 EDNRBP24530 442 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 CXCR5P32302 372 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 MPLP40238 635 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 KRT85P78386 507 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 AMPD3Q01432 767 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 KIF23Q02241 960 aaPredicted RBP1.94□□□□□ -2.1
UBXN4-207ENST00000471246 TLE1Q04724 770 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 ITKQ08881 620 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 IL10RAQ13651 578 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 RAB39AQ14964 217 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 PCBP2Q15366 365 aaKnown RBP eCLIP1.94□□□□□ -2.1
UBXN4-207ENST00000471246 ERCC6LQ2NKX8 1250 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 UAP1L1Q3KQV9 507 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 FLYWCH1Q4VC44 716 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 PABPC1LQ4VXU2 614 aaKnown RBP1.94□□□□□ -2.1
UBXN4-207ENST00000471246 PRR16Q569H4 304 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 STRIP1Q5VSL9 837 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.94□□□□□ -2.1
UBXN4-207ENST00000471246 Q6ZNX1 250 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 ZNF365Q70YC5 407 aa1.94□□□□□ -2.1
UBXN4-207ENST00000471246 FAM43AQ8N2R8 423 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms