RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 ICA1LQ8NDH6 482 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 TMC2Q8TDI7 906 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 APBB2Q92870 758 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 PNMA5Q96PV4 448 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 IGSF9BQ9UPX0 1349 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 MYH7P12883 1935 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 MED24O75448 989 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 CACNB3P54284 484 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 PPIL6Q8IXY8 311 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 SCG3Q8WXD2 468 aaKnown RBP11.1□□□□□ -0.63
RRP1B-202ENST00000470886 C18orf8Q96DM3 657 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 RTFDC1Q9BY42 306 aaPredicted RBP11.1□□□□□ -0.63
RRP1B-202ENST00000470886 TJP1Q07157 1748 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 PDHA1P08559 390 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 COPB2P35606 906 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 ZNF200P98182 395 aaPredicted RBP11.09□□□□□ -0.63
RRP1B-202ENST00000470886 SGSM1Q2NKQ1 1148 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 SWSAP1Q6NVH7 229 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 TRIML2Q8N7C3 387 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
RRP1B-202ENST00000470886 C9orf72Q96LT7 481 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 PAK5Q9P286 719 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 DDX20Q9UHI6 824 aaKnown RBP11.09□□□□□ -0.63
RRP1B-202ENST00000470886 SLC24A2Q9UI40 661 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 SYNPO2Q9UMS6 1093 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 SPATA31A6Q5VVP1 1343 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 GOLGA8MH3BSY2 632 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 SAT1P21673 171 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 GEMIN4P57678 1058 aaKnown RBP11.09□□□□□ -0.63
RRP1B-202ENST00000470886 NOP14P78316 857 aaKnown RBP11.09□□□□□ -0.63
RRP1B-202ENST00000470886 ZNF568Q3ZCX4 644 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 ZC2HC1CQ53FD0 456 aaPredicted RBP11.09□□□□□ -0.63
RRP1B-202ENST00000470886 RARS2Q5T160 578 aaKnown RBP11.09□□□□□ -0.63
RRP1B-202ENST00000470886 CIAPIN1Q6FI81 312 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 PRR5LQ6MZQ0 368 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 KCNV1Q6PIU1 500 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 MTHFD1LQ6UB35 978 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 RBBP8NLQ8NC74 664 aaPredicted RBP11.09□□□□□ -0.63
RRP1B-202ENST00000470886 FEZF2Q8TBJ5 459 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 NSL1Q96IY1 281 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 FAM167BQ9BTA0 163 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 PACSIN1Q9BY11 444 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 TMEM117Q9H0C3 514 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 RSAD1Q9HA92 442 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 RAVER2Q9HCJ3 691 aaKnown RBP11.09□□□□□ -0.63
RRP1B-202ENST00000470886 POLD4Q9HCU8 107 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 BFARQ9NZS9 450 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 KLRC4O43908 158 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 EXTL3O43909 919 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 CAND2O75155 1236 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 SRGAP2CP0DJJ0 459 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 VHLP40337 213 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 ZNF844Q08AG5 666 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 ITPRIPL1Q6GPH6 555 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 POTEAQ6S8J7 498 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 GADL1Q6ZQY3 521 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 KSR1Q8IVT5 923 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 STAP1Q9ULZ2 295 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 UBR2Q8IWV8 1755 aa11.09□□□□□ -0.63
RRP1B-202ENST00000470886 APOL1O14791 398 aa11.08□□□□□ -0.63
RRP1B-202ENST00000470886 TRAPPC3O43617 180 aa11.08□□□□□ -0.63
RRP1B-202ENST00000470886 SORBS3O60504 671 aa11.08□□□□□ -0.63
RRP1B-202ENST00000470886 RFC5P40937 340 aa11.08□□□□□ -0.63
RRP1B-202ENST00000470886 GABPAQ06546 454 aa11.08□□□□□ -0.63
RRP1B-202ENST00000470886 WDR59Q6PJI9 974 aa11.08□□□□□ -0.63
RRP1B-202ENST00000470886 HSD3B7Q9H2F3 369 aa11.08□□□□□ -0.63
RRP1B-202ENST00000470886 ACAD9Q9H845 621 aa11.08□□□□□ -0.63
RRP1B-202ENST00000470886 RXFP1Q9HBX9 757 aa11.08□□□□□ -0.63
RRP1B-202ENST00000470886 BAG5Q9UL15 447 aa11.08□□□□□ -0.63
RRP1B-202ENST00000470886 PAPPAQ13219 1627 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 FOXN3O00409 490 aaPredicted RBP11.08□□□□□ -0.64
RRP1B-202ENST00000470886 SNRPAP09012 282 aaKnown RBP11.08□□□□□ -0.64
RRP1B-202ENST00000470886 ERVK-9P63128 1117 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 SLC30A9Q6PML9 568 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 METTL23Q86XA0 190 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 THNSL1Q8IYQ7 743 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 MDM1Q8TC05 714 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 FBXO25Q8TCJ0 367 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 KCNK16Q96T55 309 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 TOPORSQ9NS56 1045 aaPredicted RBP11.08□□□□□ -0.64
RRP1B-202ENST00000470886 BLOC1S4Q9NUP1 217 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 E7ENQ6 273 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 CCNG2Q16589 344 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 EAPPQ56P03 285 aaPredicted RBP11.08□□□□□ -0.64
RRP1B-202ENST00000470886 JPH1Q9HDC5 661 aaPredicted RBP11.08□□□□□ -0.64
RRP1B-202ENST00000470886 M0QYV0 167 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 AKAP3O75969 853 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 MMP10P09238 476 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 STIP1P31948 543 aaKnown RBP11.08□□□□□ -0.64
RRP1B-202ENST00000470886 CA8P35219 290 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 DRG2P55039 364 aaKnown RBP11.08□□□□□ -0.64
RRP1B-202ENST00000470886 CDH6P55285 790 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 PPP6R3Q5H9R7 873 aaPredicted RBP11.08□□□□□ -0.64
RRP1B-202ENST00000470886 GMCL1P1Q8NEA9 526 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 SLC30A5Q8TAD4 765 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 ATP8B4Q8TF62 1192 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 CMTM5Q96DZ9 223 aa11.08□□□□□ -0.64
RRP1B-202ENST00000470886 MTMR9Q96QG7 549 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms