RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 SHANK3Q9BYB0 1731 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 ZMYM2Q9UBW7 1377 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 MYO3BQ8WXR4 1341 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 SUPT3HO75486 399 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 NMT1P30419 496 aaKnown RBP10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 CDC16Q13042 620 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 NR1H3Q13133 447 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 CYP1B1Q16678 543 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 ZNF568Q3ZCX4 644 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 ARHGAP24Q8N264 748 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 NGLY1Q96IV0 654 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 IWS1Q96ST2 819 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 PLVAPQ9BX97 442 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 MIS12Q9H081 205 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 BHMT2Q9H2M3 363 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 DNM3Q9UQ16 869 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 SLC4A7Q9Y6M7 1214 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 MAGEB2O15479 319 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 HNRNPCL1O60812 293 aaKnown RBP10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 ASLP04424 464 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 IL2RBP14784 551 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 HOXA7P31268 230 aaPredicted RBP10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 KCNQ4P56696 695 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 FASTKD3Q14CZ7 662 aaKnown RBP10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 R3HDM1Q15032 1099 aaKnown RBP10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 PCNX4Q63HM2 1172 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 RIPOR1Q6ZS17 1223 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 TAB3Q8N5C8 712 aaPredicted RBP10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 CFAP57Q96MR6 1250 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 TMEM120AQ9BXJ8 343 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 LRRC19Q9H756 370 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 USP21Q9UK80 565 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 ACTL7BQ9Y614 415 aa10.09□□□□□ -0.79
NHLRC3-203ENST00000470258 ZNF804BA4D1E1 1349 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 GOLGA8SH3BPF8 625 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 GOLGA8MH3BSY2 632 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 PDLIM1O00151 329 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 PENKP01210 267 aaPredicted RBP10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 POTEJP0CG39 1038 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 GALK1P51570 392 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 ORC2Q13416 577 aaPredicted RBP10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 CLEC10AQ8IUN9 316 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 MAP7D3Q8IWC1 876 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 RNF168Q8IYW5 571 aaPredicted RBP10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 MYCT1Q8N699 235 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 FBXO27Q8NI29 283 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 CEP95Q96GE4 821 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 PHF12Q96QT6 1004 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 GPR88Q9GZN0 384 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 PPM1HQ9ULR3 514 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 SMG5Q9UPR3 1016 aaKnown RBP10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 ZNF711Q9Y462 761 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L15C9J2P7 530 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L13C9JLJ4 530 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L11C9JVI0 530 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L18D6R9N7 530 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L22D6RA61 530 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L17D6RBQ6 530 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L19D6RCP7 530 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L20D6RJB6 530 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 ZNF189O75820 626 aaPredicted RBP10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 MUTP22033 750 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 IVDP26440 423 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 SLC12A3P55017 1021 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 AP2B1P63010 937 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L24Q0WX57 530 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 MED21Q13503 144 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 USP17L6PQ6QN14 398 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 RAPH1Q70E73 1250 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 ZC3H3Q8IXZ2 948 aaKnown RBP10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 ZNF34Q8IZ26 560 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 DENND1AQ8TEH3 1009 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 JDP2Q8WYK2 163 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 PTCD3Q96EY7 689 aaKnown RBP10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 HAPLN3Q96S86 360 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 LRRC4BQ9NT99 713 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 KANSL3Q9P2N6 904 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 FRMD4BQ9Y2L6 1034 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 ARHGAP42A6NI28 874 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 BCRP11274 1271 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 CYP19A1P11511 503 aaPredicted RBP10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 SLC16A2P36021 539 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 VPS72Q15906 364 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 CATSPER3Q86XQ3 398 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 ANKMY2Q8IV38 441 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 ZBED8Q8IZ13 594 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 SMC1BQ8NDV3 1235 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 CCDC110Q8TBZ0 833 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 GRK7Q8WTQ7 553 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 PYDC1Q8WXC3 89 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 KAT5Q92993 513 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 PPP2R3CQ969Q6 453 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 TTC17Q96AE7 1141 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 HERPUD2Q9BSE4 406 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 TSSK1BQ9BXA7 367 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 MAK16Q9BXY0 300 aaKnown RBP10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 OSBPL8Q9BZF1 889 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms