RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 K7ENM7 598 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 IGF2BP3O00425 579 aaKnown RBP eCLIP5.53□□□□□ -1.52
GCFC2-205ENST00000470197 HOXC11O43248 304 aaPredicted RBP5.53□□□□□ -1.52
GCFC2-205ENST00000470197 USO1O60763 962 aaKnown RBP5.53□□□□□ -1.52
GCFC2-205ENST00000470197 F13BP05160 661 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 GLI4P10075 376 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 NCAM1P13591 858 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 MALP21145 153 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 GABRB3P28472 473 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 TLE1Q04724 770 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 CTBP1Q13363 440 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 LILRA3Q8N6C8 439 aaPredicted RBP5.53□□□□□ -1.52
GCFC2-205ENST00000470197 OR56A3Q8NH54 315 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 TRIM54Q9BYV2 358 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 TBC1D23Q9NUY8 699 aa5.53□□□□□ -1.52
GCFC2-205ENST00000470197 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.53□□□□□ -1.52
GCFC2-205ENST00000470197 PLEKHG1Q9ULL1 1385 aa5.52□□□□□ -1.52
GCFC2-205ENST00000470197 LRRIQ1Q96JM4 1722 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 ZNF142P52746 1687 aaPredicted RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 KRIT1O00522 736 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 RARBP10826 455 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 MGAT5Q09328 741 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 ATP2B3Q16720 1220 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 ZNF827Q17R98 1081 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 FLYWCH1Q4VC44 716 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 CD276Q5ZPR3 534 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 PROSER1Q86XN7 944 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 HDAC2Q92769 488 aaKnown RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 PITHD1Q9GZP4 211 aaPredicted RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 WASH6PQ9NQA3 447 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 A0A1W2PRQ8 180 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 SEC24DO94855 1032 aaPredicted RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 MT-ND5P03915 603 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 MYL4P12829 197 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 EN2P19622 333 aaPredicted RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 KRT32Q14532 448 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 DLGAP5Q15398 846 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 KRT77Q7Z794 578 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 WFDC3Q8IUB2 231 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 FATE1Q969F0 183 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 SNX22Q96L94 193 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 MRPL46Q9H2W6 279 aaKnown RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 ADAMTS10Q9H324 1103 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 TMEM160Q9NX00 188 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 ARHGEF5Q12774 1597 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 ST20-MTHFSA0A0A6YYL1 179 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 GOLGA6L3A6NEY3 463 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 FOXO1Q12778 655 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 TRIM28Q13263 835 aaKnown RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 CNKSR3Q6P9H4 555 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 TTC7BQ86TV6 843 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 C3orf20Q8ND61 904 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 LENG1Q96BZ8 264 aaPredicted RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 NOL10Q9BSC4 688 aaKnown RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 AFF4Q9UHB7 1163 aaKnown RBP5.52□□□□□ -1.53
GCFC2-205ENST00000470197 GPR34Q9UPC5 381 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 CEP83Q9Y592 693 aa5.52□□□□□ -1.53
GCFC2-205ENST00000470197 GNAT3A8MTJ3 354 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 TOR1BO14657 336 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 MATN4O95460 622 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 PRDX5P30044 214 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 HOXD12P35452 270 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 MAN2A2P49641 1150 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 PRKG2Q13237 762 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 FBXO47Q5MNV8 452 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 RAP1GAP2Q684P5 730 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 TMX3Q96JJ7 454 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 C7orf25Q9BPX7 421 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 ZCCHC17Q9NP64 241 aaKnown RBP5.51□□□□□ -1.53
GCFC2-205ENST00000470197 RBM12Q9NTZ6 932 aaKnown RBP5.51□□□□□ -1.53
GCFC2-205ENST00000470197 ASB1Q9Y576 335 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 USP1O94782 785 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 ELF1P32519 619 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 KRT20P35900 424 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 IL12RB1P42701 662 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 RTP1P59025 263 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 MBTPS1Q14703 1052 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 UVSSAQ2YD98 709 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 ITPRIPL1Q6GPH6 555 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 TMC6Q7Z403 805 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 FAM90A1Q86YD7 464 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 TNPO1Q92973 898 aaKnown RBP5.51□□□□□ -1.53
GCFC2-205ENST00000470197 MYOCQ99972 504 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 USP44Q9H0E7 712 aa5.51□□□□□ -1.53
GCFC2-205ENST00000470197 HMX3A6NHT5 357 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 F2RL2O00254 374 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 CCT4P50991 539 aaKnown RBP5.5□□□□□ -1.53
GCFC2-205ENST00000470197 ATP8B2P98198 1209 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 CDC42EP1Q00587 391 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 RTP5Q14D33 572 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 SPATA1Q5VX52 437 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 FTSJ3Q8IY81 847 aaKnown RBP5.5□□□□□ -1.53
GCFC2-205ENST00000470197 CFHR4Q92496 578 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 ZUFSPQ96AP4 578 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 FOXB1Q99853 325 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 ADI1Q9BV57 179 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 KATNAL1Q9BW62 490 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 TDP1Q9NUW8 608 aa5.5□□□□□ -1.53
GCFC2-205ENST00000470197 PCDHB4Q9Y5E5 795 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms