RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 TRIML1Q8N9V2 468 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 HASPINQ8TF76 798 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 SLC22A17Q8WUG5 538 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 AUTS2Q8WXX7 1259 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 RABGGTAQ92696 567 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 ZNF560Q96MR9 790 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 CGRRF1Q99675 332 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 EMILIN2Q9BXX0 1053 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 RHOBTB2Q9BYZ6 727 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 MTMR12Q9C0I1 747 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 CLSTN2Q9H4D0 955 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 PCIF1Q9H4Z3 704 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 TLE6Q9H808 572 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 PDE11AQ9HCR9 933 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 PRDM6Q9NQX0 595 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 LMBRD1Q9NUN5 540 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 DZANK1Q9NVP4 752 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 CLEC1BQ9P126 229 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 MAN1B1Q9UKM7 699 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 PCDHB8Q9UN66 801 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 BACE2Q9Y5Z0 518 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 HCFC2Q9Y5Z7 792 aa8.98□□□□□ -0.97
TRAPPC3-206ENST00000469757 VCANP13611 3396 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 GOLGA8IPA6NC78 632 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 GOLGA8JA6NMD2 632 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 PPEF2O14830 753 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 TEX28O15482 410 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 CALUO43852 315 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 PRPF40AO75400 957 aaKnown RBP8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 OAZ2O95190 189 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 CSPG5O95196 566 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 CXCL14O95715 111 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 CYP11A1P05108 521 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 POU2F2P09086 479 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 TYMPP19971 482 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 TKTP29401 623 aaKnown RBP8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 MCM4P33991 863 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 PNPLA4P41247 253 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 BRCC3P46736 316 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 CYP2J2P51589 502 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 LILRA4P59901 499 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 LRRC63Q05C16 580 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 SMAD4Q13485 552 aaKnown RBP8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 MRPL58Q14197 206 aaKnown RBP8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 PSMD5Q16401 504 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 AAK1Q2M2I8 961 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 PUS10Q3MIT2 529 aaKnown RBP8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 FAM171A1Q5VUB5 890 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 CENPPQ6IPU0 288 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 ANKS3Q6ZW76 656 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 LIMS2Q7Z4I7 341 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 SMYD4Q8IYR2 804 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 ADSSL1Q8N142 457 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 TMEM130Q8N3G9 435 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 CMASQ8NFW8 434 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 LNX1Q8TBB1 728 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 PLEKHO2Q8TD55 490 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 HDAC7Q8WUI4 952 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 RIN2Q8WYP3 895 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 CASP10Q92851 521 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 B3GALT6Q96L58 329 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 KLHL5Q96PQ7 755 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 INTS13Q9NVM9 706 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 DPP3Q9NY33 737 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 CLDND1Q9NY35 253 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 KIAA1468Q9P260 1216 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 SIX4Q9UIU6 781 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 FBXW11Q9UKB1 542 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 CUL9Q8IWT3 2517 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 SCN1AP35498 2009 aa8.97□□□□□ -0.97
TRAPPC3-206ENST00000469757 ARHGEF37A1IGU5 675 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 PSMA7O14818 248 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 CLIC2O15247 247 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 SPTLC1O15269 473 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 SLC16A3O15427 465 aaKnown RBP8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 EXOC3O60645 756 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 STAU1O95793 577 aaKnown RBP8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 GLUD1P00367 558 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 HOXB8P17481 243 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 KCNA5P22460 613 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 NR2F2P24468 414 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 HOXA9P31269 272 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 PRCPP42785 496 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 TAF6P49848 677 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 AP3M2P53677 418 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 MRPS5P82675 430 aaKnown RBP8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 RBM10P98175 930 aaKnown RBP8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 TFAMQ00059 246 aaKnown RBP8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 TFF2Q03403 129 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 DLX2Q07687 328 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 SKIV2LQ15477 1246 aaKnown RBP8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 SV2CQ496J9 727 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 TPRNQ4KMQ1 711 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 VARS2Q5ST30 1063 aaKnown RBP8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 KIAA1841Q6NSI8 718 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 ANKRD54Q6NXT1 300 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 LILRA6Q6PI73 481 aa8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 PRSS55Q6UWB4 352 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC3-206ENST00000469757 RBM43Q6ZSC3 357 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms