RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 SURF1Q15526 300 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 UVSSAQ2YD98 709 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 VWA3BQ502W6 1294 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 PAN2Q504Q3 1202 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 TMEM240Q5SV17 173 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 GLB1LQ6UWU2 654 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 USP37Q86T82 979 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 WDR49Q8IV35 697 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 ABI1Q8IZP0 508 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 ZNF516Q92618 1163 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 C18orf25Q96B23 403 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 ANKRD36BP1Q96IX9 119 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 ZMAT2Q96NC0 199 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 XPO4Q9C0E2 1151 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 ASB7Q9H672 318 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 ELAC1Q9H777 363 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 GOLGA2P5Q9HBQ8 144 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 INTS13Q9NVM9 706 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 MIOSQ9NXC5 875 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 CXXC1Q9P0U4 656 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 CACNG4Q9UBN1 327 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 GIT1Q9Y2X7 761 aa9.07□□□□□ -0.96
GAPVD1-213ENST00000469498 MKI67P46013 3256 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 A0A1B0GTH6 734 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 SMIM28A0A1B0GU29 152 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 TBKBP1A7MCY6 615 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 H0YGN5 161 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 TEX33O43247 280 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 STX10O60499 249 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 EFCAB14O75071 495 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 OFD1O75665 1012 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 PIK3CAP42336 1068 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 UBASH3AP57075 661 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 POU5F1Q01860 360 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 SOX4Q06945 474 aaPredicted RBP9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 GRIK3Q13003 919 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 FILIP1LQ4L180 1135 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 CBWD6Q4V339 395 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 CBWD3Q5JTY5 395 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 CBWD5Q5RIA9 395 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 C9orf50Q5SZB4 431 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 FKBP15Q5T1M5 1219 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 TDRD10Q5VZ19 366 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 ALKAL1Q6UXT8 129 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 CD302Q8IX05 232 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 GSTCDQ8NEC7 633 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 URGCPQ8TCY9 931 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 ELMO3Q96BJ8 720 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 NAP1L5Q96NT1 182 aaPredicted RBP9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 PPP1R10Q96QC0 940 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 TRIM5Q9C035 493 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 TMEM117Q9H0C3 514 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 NDST4Q9H3R1 872 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 PLEKHA5Q9HAU0 1116 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 TMEM8AQ9HCN3 771 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 UBN1Q9NPG3 1134 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 C2CD2Q9Y426 696 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 MYO16Q9Y6X6 1858 aa9.06□□□□□ -0.96
GAPVD1-213ENST00000469498 PLXNA3P51805 1871 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 CASTOR2A6NHX0 329 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 HOXA2O43364 376 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 CBFA2T2O43439 604 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 XPOTO43592 962 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 B4GALT3O60512 393 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 N4BP1O75113 896 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 PHACTR2O75167 634 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 LRRN2O75325 713 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 VNN1O95497 513 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 HLA-DRAP01903 254 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 ITGB3P05106 788 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 THP07101 528 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 KRT19P08727 400 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 KCNE1P15382 129 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 POLR2BP30876 1174 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 KLK7P49862 253 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 CLDN10P78369 228 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 UBXN1Q04323 297 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 RNASELQ05823 741 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 ENPEPQ07075 957 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 ZACNQ401N2 412 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 XKR4Q5GH76 650 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 NOMO2Q5JPE7 1267 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 KRT39Q6A163 491 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 SCARA3Q6AZY7 606 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 SARM1Q6SZW1 724 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 C15orf39Q6ZRI6 1047 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 FAM43BQ6ZT52 329 aaPredicted RBP9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 SV2AQ7L0J3 742 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 CRIPAKQ8N1N5 446 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 BEST2Q8NFU1 509 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 TAS1R2Q8TE23 839 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 CACTINQ8WUQ7 758 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 HERVK_113Q902F9 699 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 RABGGTAQ92696 567 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 RNPC3Q96LT9 517 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 CASD1Q96PB1 797 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 CRACR2AQ9BSW2 395 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 MTIF3Q9H2K0 278 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 TBC1D13Q9NVG8 400 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms