RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 USP25Q9UHP3 1055 aa6.96□□□□□ -1.3
XRN1-207ENST00000468894 AATKQ6ZMQ8 1374 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 TMEM200CA6NKL6 621 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 AP1G1O43747 822 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 AGFG2O95081 481 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 ALDH2P05091 517 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 CKBP12277 381 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 MAKP20794 623 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 MCM7P33993 719 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 TIGD2Q4W5G0 525 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 B3GNTL1Q67FW5 361 aaPredicted RBP6.95□□□□□ -1.3
XRN1-207ENST00000468894 MARS2Q96GW9 593 aaKnown RBP6.95□□□□□ -1.3
XRN1-207ENST00000468894 TAAR9Q96RI9 348 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 TLR10Q9BXR5 811 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 KMT5AQ9NQR1 393 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 HSFX1Q9UBD0 423 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 ABCF2Q9UG63 623 aa6.95□□□□□ -1.3
XRN1-207ENST00000468894 NOB1Q9ULX3 412 aaKnown RBP6.95□□□□□ -1.3
XRN1-207ENST00000468894 ARIH2O95376 493 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 FSHBP01225 129 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 HSPA6P17066 643 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 PRDX5P30044 214 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 HSD11B2P80365 405 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 CCDC93Q567U6 631 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 FAM102BQ5T8I3 360 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 UTP14CQ5TAP6 766 aaKnown RBP6.94□□□□□ -1.3
XRN1-207ENST00000468894 FAM90A1Q86YD7 464 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 CHPFQ8IZ52 775 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 TMIEQ8NEW7 156 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 PROKR1Q8TCW9 393 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 KLHL32Q96NJ5 620 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 C1orf43Q9BWL3 253 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 LMBRD1Q9NUN5 540 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 SIDT1Q9NXL6 827 aaKnown RBP6.94□□□□□ -1.3
XRN1-207ENST00000468894 FEZ2Q9UHY8 353 aaPredicted RBP6.94□□□□□ -1.3
XRN1-207ENST00000468894 NR2E3Q9Y5X4 410 aa6.94□□□□□ -1.3
XRN1-207ENST00000468894 UNC119BA6NIH7 251 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 TSPAN6O43657 245 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 ABHD16AO95870 558 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 ADH4P08319 380 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 FTH1P19P0C7X4 201 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 TYRP14679 529 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 DDX6P26196 483 aaKnown RBP eCLIP6.93□□□□□ -1.3
XRN1-207ENST00000468894 SMARCA1P28370 1054 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 BMPR1AP36894 532 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 KLF10Q13118 480 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 CXorf57Q6NSI4 855 aaKnown RBP6.93□□□□□ -1.3
XRN1-207ENST00000468894 KCNV1Q6PIU1 500 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 TMEM132CQ8N3T6 1108 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 SLC16A11Q8NCK7 471 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 LARP4BQ92615 738 aaKnown RBP6.93□□□□□ -1.3
XRN1-207ENST00000468894 C1GALT1C1Q96EU7 318 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 KRTAP4-11Q9BYQ6 195 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 WDCPQ9H6R7 721 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 VSX1Q9NZR4 365 aaPredicted RBP6.93□□□□□ -1.3
XRN1-207ENST00000468894 KCNE5Q9UJ90 142 aa6.93□□□□□ -1.3
XRN1-207ENST00000468894 PPFIA4O75335 1185 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 GPANK1O95872 356 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 GDF5P43026 501 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 PIK3CGP48736 1102 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 NKX6-1P78426 367 aaPredicted RBP6.92□□□□□ -1.3
XRN1-207ENST00000468894 RESTQ13127 1097 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 GTF2H3Q13889 308 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 NXNQ6DKJ4 435 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 Q6ZPA2 131 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 ZNF627Q7L945 461 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 SLC35G2Q8TBE7 412 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 NEU4Q8WWR8 484 aaPredicted RBP6.92□□□□□ -1.3
XRN1-207ENST00000468894 PNKPQ96T60 521 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 CGRRF1Q99675 332 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 ANKFY1Q9P2R3 1169 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 ING1Q9UK53 422 aaPredicted RBP6.92□□□□□ -1.3
XRN1-207ENST00000468894 CDYLQ9Y232 598 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 STXBP5LQ9Y2K9 1186 aa6.92□□□□□ -1.3
XRN1-207ENST00000468894 PRSS29PA6NIE9 313 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 E9PLN8 166 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 AKAP8O43823 692 aaKnown RBP6.91□□□□□ -1.3
XRN1-207ENST00000468894 ZFPL1O95159 310 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 SPDEFO95238 335 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 MATN4O95460 622 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 HLA-DOAP06340 250 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 IL12RB1P42701 662 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 CXADRP78310 365 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 TP53BP2Q13625 1128 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 PLS1Q14651 629 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 LY6G5CQ5SRR4 150 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 USP51Q70EK9 711 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 PPP1R3BQ86XI6 285 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 DENND1CQ8IV53 801 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 ARHGEF19Q8IW93 802 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 TCEAL8Q8IYN2 117 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 SH2D3CQ8N5H7 860 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 MAGEB6Q8N7X4 407 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 PLBD2Q8NHP8 589 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 PPP1R35Q8TAP8 253 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 RUNDC1Q96C34 613 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 FAM167AQ96KS9 214 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 ACO2Q99798 780 aaKnown RBP6.91□□□□□ -1.3
XRN1-207ENST00000468894 VKORC1Q9BQB6 163 aa6.91□□□□□ -1.3
XRN1-207ENST00000468894 TMPRSS5Q9H3S3 457 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms