RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ZCWPW2Q504Y3 356 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 ZC2HC1CQ53FD0 456 aaPredicted RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 PPP2R2DQ66LE6 453 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 CENPPQ6IPU0 288 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 ARMCX5Q6P1M9 558 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 SLC39A4Q6P5W5 647 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 BRSK2Q8IWQ3 736 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 PARP9Q8IXQ6 854 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 SYCP3Q8IZU3 236 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 ADSSL1Q8N142 457 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 MLKLQ8NB16 471 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 KIAA0895Q8NCT3 520 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 SYAP1Q96A49 352 aaPredicted RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 BICD1Q96G01 975 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 DHTKD1Q96HY7 919 aaPredicted RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 CPB2Q96IY4 423 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 SNX27Q96L92 541 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 ZNF558Q96NG5 402 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 ACAP3Q96P50 834 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 PPP1R10Q96QC0 940 aaKnown RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 RPS6KC1Q96S38 1066 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 GAD1Q99259 594 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 TCHPQ9BT92 498 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 MSTO1Q9BUK6 570 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 OXCT2Q9BYC2 517 aaPredicted RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 NUP62CLQ9H1M0 184 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 BLZF1Q9H2G9 400 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 KCTD10Q9H3F6 313 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 CLSTN2Q9H4D0 955 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 TBC1D13Q9NVG8 400 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 DMAC2Q9NW81 257 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 ANKFY1Q9P2R3 1169 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 AGO2Q9UKV8 859 aaKnown RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 CDV3Q9UKY7 258 aaKnown RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 YBX2Q9Y2T7 364 aaKnown RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 PCDHB12Q9Y5F1 795 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 IRAK3Q9Y616 596 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 TSC2P49815 1807 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 DENND4AQ7Z401 1863 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 DENND4CQ5VZ89 1909 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 PTPRDP23468 1912 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SF3B1O75533 1304 aaKnown RBP eCLIP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SMIM28A0A1B0GU29 152 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 ARHGEF37A1IGU5 675 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 LCHNA4D1U4 455 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 ZNF233A6NK53 670 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 GRXCR1A8MXD5 290 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SOX1O00570 391 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PTGESO14684 152 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 TRIM66O15016 1216 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PMM2O15305 246 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SLC16A3O15427 465 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 TRAPPC3O43617 180 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 NCK2O43639 380 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 CALUO43852 315 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 MAN1A2O60476 641 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 GADD45BO75293 160 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 LETM1O95202 739 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PAPLNO95428 1278 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 STAU1O95793 577 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 CAVIN2O95810 425 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 GNA14O95837 355 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 EFEMP2O95967 443 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 ALDH2P05091 517 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 THP07101 528 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 GALTP07902 379 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 FAM163BP0C2L3 166 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 AKAP5P24588 427 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 ERCC5P28715 1186 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 CASP1P29466 404 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 LRPAP1P30533 357 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PNPLA4P41247 253 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 AARSP49588 968 aaKnown RBP eCLIP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 RABGGTBP53611 331 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 MARSP56192 900 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 FKBP3Q00688 224 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 CREMQ03060 361 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 KRT17Q04695 432 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 RNASELQ05823 741 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PPP2R3AQ06190 1150 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 KCNA1Q09470 495 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PNOCQ13519 176 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 BMS1Q14692 1282 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 COL19A1Q14993 1142 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PSMD6Q15008 389 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 NAB2Q15742 525 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 ENOX2Q16206 610 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SNRNP35Q16560 246 aaKnown RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SKOR2Q2VWA4 1001 aaPredicted RBP3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SLC10A6Q3KNW5 377 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 EPC2Q52LR7 807 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 TIGD5Q53EQ6 642 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 CCDC183Q5T5S1 534 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 SPATA1Q5VX52 437 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 EEF1DP3Q658K8 133 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 PDXDC1Q6P996 788 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 DCLRE1AQ6PJP8 1040 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 KCNT2Q6UVM3 1135 aa3.82□□□□□ -1.8
TRIM59-202ENST00000468542 CRELD2Q6UXH1 353 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms