RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ZBTB6Q15916 424 aa26.69■■□□□ 1.86
PTCH1-210ENST00000468211 SPECC1Q5M775 1068 aa26.69■■□□□ 1.86
PTCH1-210ENST00000468211 MTSS1LQ765P7 747 aa26.69■■□□□ 1.86
PTCH1-210ENST00000468211 DDX12PQ92771 950 aa26.69■■□□□ 1.86
PTCH1-210ENST00000468211 MCRS1Q96EZ8 462 aa26.69■■□□□ 1.86
PTCH1-210ENST00000468211 CALML4Q96GE6 196 aa26.69■■□□□ 1.86
PTCH1-210ENST00000468211 CYP4F11Q9HBI6 524 aa26.69■■□□□ 1.86
PTCH1-210ENST00000468211 TBX20Q9UMR3 447 aa26.69■■□□□ 1.86
PTCH1-210ENST00000468211 CACNA1IQ9P0X4 2223 aa26.69■■□□□ 1.86
PTCH1-210ENST00000468211 LRRN2O75325 713 aa26.68■■□□□ 1.86
PTCH1-210ENST00000468211 CEBPBP17676 345 aa26.68■■□□□ 1.86
PTCH1-210ENST00000468211 ZNF131P52739 623 aa26.68■■□□□ 1.86
PTCH1-210ENST00000468211 SNW1Q13573 536 aaKnown RBP26.68■■□□□ 1.86
PTCH1-210ENST00000468211 TCEAL8Q8IYN2 117 aa26.68■■□□□ 1.86
PTCH1-210ENST00000468211 MYCT1Q8N699 235 aa26.68■■□□□ 1.86
PTCH1-210ENST00000468211 RAD54LQ92698 747 aa26.68■■□□□ 1.86
PTCH1-210ENST00000468211 PLA2G2FQ9BZM2 168 aa26.68■■□□□ 1.86
PTCH1-210ENST00000468211 PLEKHA5Q9HAU0 1116 aa26.68■■□□□ 1.86
PTCH1-210ENST00000468211 INSL5Q9Y5Q6 135 aa26.68■■□□□ 1.86
PTCH1-210ENST00000468211 WDR87Q6ZQQ6 2873 aa26.68■■□□□ 1.86
PTCH1-210ENST00000468211 LACTBL1A8MY62 500 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 H0YCG3 227 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 FAM13AO94988 1023 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 LRG1P02750 347 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 GLULP15104 373 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 PTPN2P17706 415 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 ELF1P32519 619 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 LIG4P49917 911 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 STARD6P59095 220 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 ENOX2Q16206 610 aaKnown RBP26.67■■□□□ 1.86
PTCH1-210ENST00000468211 SLC39A4Q6P5W5 647 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 USP49Q70CQ1 688 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 BRAPQ7Z569 592 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 TCEAL4Q96EI5 215 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 KIF12Q96FN5 646 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 FIZ1Q96SL8 496 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 CORO1BQ9BR76 489 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 AVENQ9NQS1 362 aaPredicted RBP26.67■■□□□ 1.86
PTCH1-210ENST00000468211 PCDHB8Q9UN66 801 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 SIT1Q9Y3P8 196 aa26.67■■□□□ 1.86
PTCH1-210ENST00000468211 TIMM13Q9Y5L4 95 aaPredicted RBP26.67■■□□□ 1.86
PTCH1-210ENST00000468211 K7ENM7 598 aa26.66■■□□□ 1.86
PTCH1-210ENST00000468211 HNRNPDLO14979 420 aaKnown RBP26.66■■□□□ 1.86
PTCH1-210ENST00000468211 PIGRP01833 764 aa26.66■■□□□ 1.86
PTCH1-210ENST00000468211 LRPAP1P30533 357 aa26.66■■□□□ 1.86
PTCH1-210ENST00000468211 LONP1P36776 959 aaKnown RBP26.66■■□□□ 1.86
PTCH1-210ENST00000468211 CCR2P41597 374 aa26.66■■□□□ 1.86
PTCH1-210ENST00000468211 PRSS36Q5K4E3 855 aa26.66■■□□□ 1.86
PTCH1-210ENST00000468211 ZNF280DQ6N043 979 aa26.66■■□□□ 1.86
PTCH1-210ENST00000468211 APPL2Q8NEU8 664 aa26.66■■□□□ 1.86
PTCH1-210ENST00000468211 PJA1Q8NG27 643 aa26.66■■□□□ 1.86
PTCH1-210ENST00000468211 PARVGQ9HBI0 331 aa26.66■■□□□ 1.86
PTCH1-210ENST00000468211 FANCMQ8IYD8 2048 aa26.65■■□□□ 1.86
PTCH1-210ENST00000468211 M0QZQ0 153 aa26.65■■□□□ 1.86
PTCH1-210ENST00000468211 PPEF2O14830 753 aa26.65■■□□□ 1.86
PTCH1-210ENST00000468211 TRAK2O60296 914 aa26.65■■□□□ 1.86
PTCH1-210ENST00000468211 ADCY1Q08828 1119 aa26.65■■□□□ 1.86
PTCH1-210ENST00000468211 CUL4AQ13619 759 aa26.65■■□□□ 1.86
PTCH1-210ENST00000468211 TPGS2Q68CL5 300 aa26.65■■□□□ 1.86
PTCH1-210ENST00000468211 RNF19BQ6ZMZ0 732 aa26.65■■□□□ 1.86
PTCH1-210ENST00000468211 SPTBN4Q9H254 2564 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 OGTO15294 1046 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 VNN2O95498 520 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 BMP15O95972 392 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 ADRB2P07550 413 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 NMT1P30419 496 aaKnown RBP26.64■■□□□ 1.86
PTCH1-210ENST00000468211 PPP2R3AQ06190 1150 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 SLC44A4Q53GD3 710 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 TANGO2Q6ICL3 276 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 HS6ST3Q8IZP7 471 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 NKD2Q969F2 451 aaPredicted RBP26.64■■□□□ 1.86
PTCH1-210ENST00000468211 EPSTI1Q96J88 318 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 DDX23Q9BUQ8 820 aaKnown RBP26.64■■□□□ 1.86
PTCH1-210ENST00000468211 ZHX3Q9H4I2 956 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 GDE1Q9NZC3 331 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 CEP72Q9P209 647 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 AFF4Q9UHB7 1163 aaKnown RBP26.64■■□□□ 1.86
PTCH1-210ENST00000468211 UBQLN1Q9UMX0 589 aaKnown RBP26.64■■□□□ 1.86
PTCH1-210ENST00000468211 MTF2Q9Y483 593 aaPredicted RBP26.64■■□□□ 1.86
PTCH1-210ENST00000468211 CLIC4Q9Y696 253 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 SCN1AP35498 2009 aa26.64■■□□□ 1.86
PTCH1-210ENST00000468211 TSC2P49815 1807 aa26.64■■□□□ 1.85
PTCH1-210ENST00000468211 PATJQ8NI35 1801 aa26.64■■□□□ 1.85
PTCH1-210ENST00000468211 A0A0B4J269 797 aa26.63■■□□□ 1.85
PTCH1-210ENST00000468211 VPS37CA5D8V6 355 aaPredicted RBP26.63■■□□□ 1.85
PTCH1-210ENST00000468211 TISP43B9A030 160 aa26.63■■□□□ 1.85
PTCH1-210ENST00000468211 KRT18P05783 430 aaKnown RBP26.63■■□□□ 1.85
PTCH1-210ENST00000468211 CYP3A5P20815 502 aa26.63■■□□□ 1.85
PTCH1-210ENST00000468211 MARCKSP29966 332 aaPredicted RBP26.63■■□□□ 1.85
PTCH1-210ENST00000468211 AARSP49588 968 aaKnown RBP eCLIP26.63■■□□□ 1.85
PTCH1-210ENST00000468211 PTPAQ15257 358 aa26.63■■□□□ 1.85
PTCH1-210ENST00000468211 MLF2Q15773 248 aaPredicted RBP26.63■■□□□ 1.85
PTCH1-210ENST00000468211 ZC2HC1CQ53FD0 456 aaPredicted RBP26.63■■□□□ 1.85
PTCH1-210ENST00000468211 RASSF8Q8NHQ8 419 aa26.63■■□□□ 1.85
PTCH1-210ENST00000468211 LARP4BQ92615 738 aaKnown RBP26.63■■□□□ 1.85
PTCH1-210ENST00000468211 ANKRD63C9JTQ0 380 aa26.62■■□□□ 1.85
PTCH1-210ENST00000468211 ECI2O75521 394 aa26.62■■□□□ 1.85
PTCH1-210ENST00000468211 OAZ2O95190 189 aa26.62■■□□□ 1.85
PTCH1-210ENST00000468211 OR4Q2P0C623 313 aa26.62■■□□□ 1.85
PTCH1-210ENST00000468211 CPB1P15086 417 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms