RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 DDX12PQ92771 950 aa22.98■■□□□ 1.27
COL9A3-207ENST00000467819 HAPLN2Q9GZV7 340 aa22.98■■□□□ 1.27
COL9A3-207ENST00000467819 GDE1Q9NZC3 331 aa22.98■■□□□ 1.27
COL9A3-207ENST00000467819 KCND2Q9NZV8 630 aa22.98■■□□□ 1.27
COL9A3-207ENST00000467819 INSL5Q9Y5Q6 135 aa22.98■■□□□ 1.27
COL9A3-207ENST00000467819 NCKAP1LP55160 1127 aa22.97■■□□□ 1.27
COL9A3-207ENST00000467819 PRKCQQ04759 706 aa22.97■■□□□ 1.27
COL9A3-207ENST00000467819 DHX8Q14562 1220 aaKnown RBP22.97■■□□□ 1.27
COL9A3-207ENST00000467819 ARSHQ5FYA8 562 aa22.97■■□□□ 1.27
COL9A3-207ENST00000467819 POTEHQ6S545 545 aa22.97■■□□□ 1.27
COL9A3-207ENST00000467819 TCEAL8Q8IYN2 117 aa22.97■■□□□ 1.27
COL9A3-207ENST00000467819 APPL2Q8NEU8 664 aa22.97■■□□□ 1.27
COL9A3-207ENST00000467819 TCEAL4Q96EI5 215 aa22.97■■□□□ 1.27
COL9A3-207ENST00000467819 KIF12Q96FN5 646 aa22.97■■□□□ 1.27
COL9A3-207ENST00000467819 PLA2G2FQ9BZM2 168 aa22.97■■□□□ 1.27
COL9A3-207ENST00000467819 AVENQ9NQS1 362 aaPredicted RBP22.97■■□□□ 1.27
COL9A3-207ENST00000467819 LARSQ9P2J5 1176 aaKnown RBP22.97■■□□□ 1.27
COL9A3-207ENST00000467819 ECI2O75521 394 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 SP9P0CG40 484 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 CPB1P15086 417 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 CD72P21854 359 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 TNFSF9P41273 254 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 ADCY1Q08828 1119 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 TPGS2Q68CL5 300 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 HAUS6Q7Z4H7 955 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 GPBP1Q86WP2 473 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 REEP2Q9BRK0 252 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 DDX23Q9BUQ8 820 aaKnown RBP22.96■■□□□ 1.27
COL9A3-207ENST00000467819 PCDHB8Q9UN66 801 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 SMC3Q9UQE7 1217 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 MTF2Q9Y483 593 aaPredicted RBP22.96■■□□□ 1.27
COL9A3-207ENST00000467819 TICRRQ7Z2Z1 1910 aa22.96■■□□□ 1.27
COL9A3-207ENST00000467819 H0YCG3 227 aa22.95■■□□□ 1.26
COL9A3-207ENST00000467819 LMNAP02545 664 aaKnown RBP22.95■■□□□ 1.26
COL9A3-207ENST00000467819 CLTAP09496 248 aa22.95■■□□□ 1.26
COL9A3-207ENST00000467819 MARCKSP29966 332 aaPredicted RBP22.95■■□□□ 1.26
COL9A3-207ENST00000467819 LIG4P49917 911 aa22.95■■□□□ 1.26
COL9A3-207ENST00000467819 PRSS36Q5K4E3 855 aa22.95■■□□□ 1.26
COL9A3-207ENST00000467819 TANGO2Q6ICL3 276 aa22.95■■□□□ 1.26
COL9A3-207ENST00000467819 TPRG1Q6ZUI0 275 aa22.95■■□□□ 1.26
COL9A3-207ENST00000467819 PDZD4Q76G19 769 aaPredicted RBP22.95■■□□□ 1.26
COL9A3-207ENST00000467819 ELMOD1Q8N336 334 aa22.95■■□□□ 1.26
COL9A3-207ENST00000467819 CALML4Q96GE6 196 aa22.95■■□□□ 1.26
COL9A3-207ENST00000467819 PLEKHA5Q9HAU0 1116 aa22.95■■□□□ 1.26
COL9A3-207ENST00000467819 AFF4Q9UHB7 1163 aaKnown RBP22.95■■□□□ 1.26
COL9A3-207ENST00000467819 TTC26A0AVF1 554 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 FAM170BA6NMN3 283 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 CCR2P41597 374 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 PPP2R3AQ06190 1150 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 TWF1Q12792 350 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 ZC3H14Q6PJT7 736 aaKnown RBP22.94■■□□□ 1.26
COL9A3-207ENST00000467819 RNF19BQ6ZMZ0 732 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 LRRC15Q8TF66 581 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 AK8Q96MA6 479 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 BCO2Q9BYV7 579 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 SEMA4AQ9H3S1 761 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 LTB4R2Q9NPC1 389 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 SPATA6Q9NWH7 488 aaPredicted RBP22.94■■□□□ 1.26
COL9A3-207ENST00000467819 ODF2LQ9ULJ1 636 aa22.94■■□□□ 1.26
COL9A3-207ENST00000467819 TIMM13Q9Y5L4 95 aaPredicted RBP22.94■■□□□ 1.26
COL9A3-207ENST00000467819 TCHHQ07283 1943 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 K7ENM7 598 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 NRG2O14511 850 aaPredicted RBP22.93■■□□□ 1.26
COL9A3-207ENST00000467819 ZNF197O14709 1029 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 HNRNPDLO14979 420 aaKnown RBP22.93■■□□□ 1.26
COL9A3-207ENST00000467819 FAM13AO94988 1023 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 UBA7P41226 1012 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 GUCY2FP51841 1108 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 YWHAHQ04917 246 aaPredicted RBP22.93■■□□□ 1.26
COL9A3-207ENST00000467819 GRM2Q14416 872 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 ZBTB41Q5SVQ8 909 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 IQCEQ6IPM2 695 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 HS6ST3Q8IZP7 471 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 MYCT1Q8N699 235 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 ELSPBP1Q96BH3 223 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 HEBP1Q9NRV9 189 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 CEP72Q9P209 647 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 TBX20Q9UMR3 447 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 UBQLN1Q9UMX0 589 aaKnown RBP22.93■■□□□ 1.26
COL9A3-207ENST00000467819 TSC2P49815 1807 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 OTOGLQ3ZCN5 2332 aa22.93■■□□□ 1.26
COL9A3-207ENST00000467819 COL4A2P08572 1712 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 LACTBL1A8MY62 500 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 M0QZQ0 153 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
COL9A3-207ENST00000467819 FCARP24071 287 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 LRPAP1P30533 357 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 FAM78AQ5JUQ0 283 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 CYP4A22Q5TCH4 519 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 LARP1BQ659C4 914 aaKnown RBP22.92■■□□□ 1.26
COL9A3-207ENST00000467819 MAML2Q8IZL2 1156 aaPredicted RBP22.92■■□□□ 1.26
COL9A3-207ENST00000467819 RASSF8Q8NHQ8 419 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 ZNF512Q96ME7 567 aaPredicted RBP22.92■■□□□ 1.26
COL9A3-207ENST00000467819 ZHX3Q9H4I2 956 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 UPF2Q9HAU5 1272 aaKnown RBP22.92■■□□□ 1.26
COL9A3-207ENST00000467819 ZFP14Q9HCL3 533 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 FRYLO94915 3013 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 F5P12259 2224 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 DCHS1Q96JQ0 3298 aa22.92■■□□□ 1.26
COL9A3-207ENST00000467819 LAMTOR5O43504 91 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms