RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 TKTP29401 623 aaKnown RBP28.14■■■□□ 2.1
PDCD4-205ENST00000467574 SNRNP35Q16560 246 aaKnown RBP28.14■■■□□ 2.1
PDCD4-205ENST00000467574 C9orf57Q5W0N0 161 aa28.14■■■□□ 2.1
PDCD4-205ENST00000467574 LLGL2Q6P1M3 1020 aa28.14■■■□□ 2.1
PDCD4-205ENST00000467574 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.14■■■□□ 2.1
PDCD4-205ENST00000467574 LNX1Q8TBB1 728 aaPredicted RBP28.14■■■□□ 2.1
PDCD4-205ENST00000467574 SUSD3Q96L08 255 aa28.14■■■□□ 2.1
PDCD4-205ENST00000467574 EMILIN2Q9BXX0 1053 aa28.14■■■□□ 2.1
PDCD4-205ENST00000467574 KIAA1586Q9HCI6 787 aa28.14■■■□□ 2.1
PDCD4-205ENST00000467574 RMND1Q9NWS8 449 aa28.14■■■□□ 2.1
PDCD4-205ENST00000467574 HOOK1Q9UJC3 728 aaKnown RBP28.14■■■□□ 2.1
PDCD4-205ENST00000467574 PTPRJQ12913 1337 aa28.14■■■□□ 2.09
PDCD4-205ENST00000467574 TRAPPC3O43617 180 aa28.13■■■□□ 2.09
PDCD4-205ENST00000467574 SMC2O95347 1197 aa28.13■■■□□ 2.09
PDCD4-205ENST00000467574 SLC9A9Q8IVB4 645 aa28.13■■■□□ 2.09
PDCD4-205ENST00000467574 SMARCE1Q969G3 411 aa28.13■■■□□ 2.09
PDCD4-205ENST00000467574 GZF1Q9H116 711 aaPredicted RBP28.13■■■□□ 2.09
PDCD4-205ENST00000467574 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.13■■■□□ 2.09
PDCD4-205ENST00000467574 FNIP2Q9P278 1114 aa28.13■■■□□ 2.09
PDCD4-205ENST00000467574 PIRO00625 290 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 EPCAMP16422 314 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 RPL17P18621 184 aaKnown RBP28.12■■■□□ 2.09
PDCD4-205ENST00000467574 CLCN4P51793 760 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 AAK1Q2M2I8 961 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 ZCWPW2Q504Y3 356 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 CEP57Q86XR8 500 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 CXorf38Q8TB03 319 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 DPP3Q9NY33 737 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 TRAF3IP3Q9Y228 551 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 NUB1Q9Y5A7 615 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 MUC3AQ02505 3323 aa28.12■■■□□ 2.09
PDCD4-205ENST00000467574 KIF20AO95235 890 aa28.11■■■□□ 2.09
PDCD4-205ENST00000467574 MCM4P33991 863 aa28.11■■■□□ 2.09
PDCD4-205ENST00000467574 CYP24A1Q07973 514 aa28.11■■■□□ 2.09
PDCD4-205ENST00000467574 CLUL1Q15846 466 aa28.11■■■□□ 2.09
PDCD4-205ENST00000467574 PSMD5Q16401 504 aa28.11■■■□□ 2.09
PDCD4-205ENST00000467574 COBLL1Q53SF7 1204 aa28.11■■■□□ 2.09
PDCD4-205ENST00000467574 ZNF658Q5TYW1 1059 aaPredicted RBP28.11■■■□□ 2.09
PDCD4-205ENST00000467574 C1orf127Q8N9H9 656 aa28.11■■■□□ 2.09
PDCD4-205ENST00000467574 CUL9Q8IWT3 2517 aa28.11■■■□□ 2.09
PDCD4-205ENST00000467574 M0QZQ0 153 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 SYN3O14994 580 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 SPTLC1O15269 473 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 NR3C1P04150 777 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 ADH1AP07327 375 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 BMP1P13497 986 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 KLRC2P26717 231 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 TFAMQ00059 246 aaKnown RBP28.1■■■□□ 2.09
PDCD4-205ENST00000467574 CREMQ03060 361 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 TJAP1Q5JTD0 557 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 SCARA3Q6AZY7 606 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 ANKRD54Q6NXT1 300 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 SYCE2Q6PIF2 218 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 PPFIBP1Q86W92 1011 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 RDH13Q8NBN7 331 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 SMRP1Q8NCR6 262 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 CASP10Q92851 521 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 CLSTN3Q9BQT9 956 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 LMBRD1Q9NUN5 540 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 MTRRQ9UBK8 725 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 CD207Q9UJ71 328 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 MAN1B1Q9UKM7 699 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 C2orf16Q68DN1 1984 aa28.1■■■□□ 2.09
PDCD4-205ENST00000467574 ADAM12O43184 909 aa28.09■■■□□ 2.09
PDCD4-205ENST00000467574 EXOC3O60645 756 aa28.09■■■□□ 2.09
PDCD4-205ENST00000467574 PRCPP42785 496 aa28.09■■■□□ 2.09
PDCD4-205ENST00000467574 LILRA4P59901 499 aa28.09■■■□□ 2.09
PDCD4-205ENST00000467574 PSMD6Q15008 389 aa28.09■■■□□ 2.09
PDCD4-205ENST00000467574 NFIL3Q16649 462 aa28.09■■■□□ 2.09
PDCD4-205ENST00000467574 LMBRD2Q68DH5 695 aaPredicted RBP28.09■■■□□ 2.09
PDCD4-205ENST00000467574 OR5B17Q8NGF7 314 aa28.09■■■□□ 2.09
PDCD4-205ENST00000467574 MFSD14AQ96MC6 490 aa28.09■■■□□ 2.09
PDCD4-205ENST00000467574 MTMR12Q9C0I1 747 aa28.09■■■□□ 2.09
PDCD4-205ENST00000467574 INTS13Q9NVM9 706 aa28.09■■■□□ 2.09
PDCD4-205ENST00000467574 SRGAP2BP0DMP2 458 aa28.08■■■□□ 2.09
PDCD4-205ENST00000467574 MRPL58Q14197 206 aaKnown RBP28.08■■■□□ 2.09
PDCD4-205ENST00000467574 MYBPC2Q14324 1141 aa28.08■■■□□ 2.09
PDCD4-205ENST00000467574 SURF1Q15526 300 aa28.08■■■□□ 2.09
PDCD4-205ENST00000467574 VARS2Q5ST30 1063 aaKnown RBP28.08■■■□□ 2.09
PDCD4-205ENST00000467574 PDXDC1Q6P996 788 aa28.08■■■□□ 2.09
PDCD4-205ENST00000467574 RSPO2Q6UXX9 243 aaPredicted RBP28.08■■■□□ 2.09
PDCD4-205ENST00000467574 PLEKHO2Q8TD55 490 aa28.08■■■□□ 2.09
PDCD4-205ENST00000467574 SIX4Q9UIU6 781 aa28.08■■■□□ 2.09
PDCD4-205ENST00000467574 PCDHB8Q9UN66 801 aa28.08■■■□□ 2.09
PDCD4-205ENST00000467574 BDP1A6H8Y1 2624 aa28.07■■■□□ 2.08
PDCD4-205ENST00000467574 GRXCR2A6NFK2 248 aa28.07■■■□□ 2.08
PDCD4-205ENST00000467574 CALUO43852 315 aaPredicted RBP28.07■■■□□ 2.08
PDCD4-205ENST00000467574 TBC1D4O60343 1298 aa28.07■■■□□ 2.08
PDCD4-205ENST00000467574 BMP6P22004 513 aa28.07■■■□□ 2.08
PDCD4-205ENST00000467574 CASP4P49662 377 aa28.07■■■□□ 2.08
PDCD4-205ENST00000467574 SMAD4Q13485 552 aaKnown RBP28.07■■■□□ 2.08
PDCD4-205ENST00000467574 PTCRAQ6ISU1 281 aaPredicted RBP28.07■■■□□ 2.08
PDCD4-205ENST00000467574 ANKS3Q6ZW76 656 aa28.07■■■□□ 2.08
PDCD4-205ENST00000467574 WDR49Q8IV35 697 aa28.07■■■□□ 2.08
PDCD4-205ENST00000467574 GLYCTKQ8IVS8 523 aa28.07■■■□□ 2.08
PDCD4-205ENST00000467574 S1PR5Q9H228 398 aa28.07■■■□□ 2.08
PDCD4-205ENST00000467574 BACE2Q9Y5Z0 518 aa28.07■■■□□ 2.08
PDCD4-205ENST00000467574 MBTPS2O43462 519 aa28.06■■■□□ 2.08
PDCD4-205ENST00000467574 GLUD1P00367 558 aa28.06■■■□□ 2.08
PDCD4-205ENST00000467574 ITGB3P05106 788 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms