RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 ANKS3Q6ZW76 656 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 CEP57Q86XR8 500 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 SIX5Q8N196 739 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 FLCNQ8NFG4 579 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 KCNN1Q92952 543 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 B3GALT6Q96L58 329 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 MYADMQ96S97 322 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 MSTO1Q9BUK6 570 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 ST6GALNAC4Q9H4F1 302 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 KCNH3Q9ULD8 1083 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 PCDHB13Q9Y5F0 798 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 BACE2Q9Y5Z0 518 aa15.31■□□□□ 0.04
CCHCR1-211ENST00000467553 A0A1B0GVL5 298 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 B3GAT3O94766 335 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 PIGRP01833 764 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 CLTAP09496 248 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 FSHRP23945 695 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 TNFSF9P41273 254 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 AFMP43652 599 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 ASIC1P78348 528 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 UPP1Q16831 310 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 SLC10A6Q3KNW5 377 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 PHLDB3Q6NSJ2 640 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 SLC39A4Q6P5W5 647 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 PRSS55Q6UWB4 352 aaPredicted RBP15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 MTSS1LQ765P7 747 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 MAP4K3Q8IVH8 894 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 CCDC105Q8IYK2 499 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 CEP57L1Q8IYX8 460 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 FEZF2Q8TBJ5 459 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 FAM212AQ96EL1 285 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 SNX27Q96L92 541 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 ZMAT2Q96NC0 199 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 ACCSQ96QU6 501 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 TRIM9Q9C026 710 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 SCAND2PQ9GZW5 306 aaPredicted RBP15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 IKZF4Q9H2S9 585 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 GOLGA2P5Q9HBQ8 144 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 SLC2A4RGQ9NR83 387 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 MTRRQ9UBK8 725 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 SERTAD1Q9UHV2 236 aa15.3■□□□□ 0.04
CCHCR1-211ENST00000467553 VWA8A3KMH1 1905 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 FRMD3A2A2Y4 597 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 TISP43B9A030 160 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 TULP1O00294 542 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 OGTO15294 1046 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 PRPF6O94906 941 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 C8AP07357 584 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 CXCL8P10145 99 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 MYBP10242 640 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 RPL17P18621 184 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 CMA1P23946 247 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 CASP1P29466 404 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 RPL9P32969 192 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 CLCNKBP51801 687 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 SPAG1Q07617 926 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 KCNA1Q09470 495 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 KYAT1Q16773 422 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 GET4Q7L5D6 327 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 GLYCTKQ8IVS8 523 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 SYCP3Q8IZU3 236 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 HPS3Q969F9 1004 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 HVCN1Q96D96 273 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 SHDQ96IW2 340 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 C7orf25Q9BPX7 421 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 PYM1Q9BRP8 204 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 BLZF1Q9H2G9 400 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 SEMA4AQ9H3S1 761 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 RPF1Q9H9Y2 349 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 GDPD2Q9HCC8 539 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 OLFML3Q9NRN5 406 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 CDH7Q9ULB5 785 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 EXOC7Q9UPT5 735 aa15.29■□□□□ 0.04
CCHCR1-211ENST00000467553 A0A0B4J269 797 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 LACTBL1A8MY62 500 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 PPP1R37O75864 691 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 KCNE1P15382 129 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 RFX1P22670 979 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 IGFBP6P24592 240 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 CASP5P51878 434 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 SOX4Q06945 474 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 HTR4Q13639 388 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 ZBTB41Q5SVQ8 909 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 L1TD1Q5T7N2 865 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 SLFN12LQ6IEE8 588 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 GRAMD1CQ8IYS0 662 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 DTWD2Q8NBA8 298 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 POMGNT1Q8WZA1 660 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 C18orf25Q96B23 403 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 STRA6Q9BX79 667 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 FGFBP2Q9BYJ0 223 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 MAGEF1Q9HAY2 307 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 AVENQ9NQS1 362 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 FAM86C1Q9NVL1 165 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 CNTN3Q9P232 1028 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 MAFFQ9ULX9 164 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 VPS13AQ96RL7 3174 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 CFAP54Q96N23 3096 aa15.28■□□□□ 0.04
CCHCR1-211ENST00000467553 STK25O00506 426 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms