RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CCDC86Q9H6F5 360 aaKnown RBP11.32□□□□□ -0.6
HDAC3-203ENST00000467533 POLR3BQ9NW08 1133 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-203ENST00000467533 CACNA2D2Q9NY47 1150 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 CEP72Q9P209 647 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 NAP1L2Q9ULW6 460 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-203ENST00000467533 LAMA5O15230 3695 aa11.32□□□□□ -0.6
HDAC3-203ENST00000467533 ATG2BQ96BY7 2078 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 ASCC3Q8N3C0 2202 aaKnown RBP11.31□□□□□ -0.6
HDAC3-203ENST00000467533 CCDC194A0A1B0GVG4 234 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 A0A1W2PRU2 124 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 FAM221BA6H8Z2 402 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 TBX3O15119 743 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 SGSM2O43147 1006 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 EDIL3O43854 480 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 APBB3O95704 486 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 PRB1P04280 392 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 GSPT1P15170 499 aaKnown RBP11.31□□□□□ -0.6
HDAC3-203ENST00000467533 CHMLP26374 656 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 YWHABP31946 246 aaKnown RBP11.31□□□□□ -0.6
HDAC3-203ENST00000467533 BRCC3P46736 316 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 CLCNKBP51801 687 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 DGKEP52429 567 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 EPHA5P54756 1037 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 IRX4P78413 519 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 NUCB1Q02818 461 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 GRSF1Q12849 480 aaKnown RBP eCLIP11.31□□□□□ -0.6
HDAC3-203ENST00000467533 NAB2Q15742 525 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 TMEM132AQ24JP5 1023 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 Q4G0T1 1027 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 XKR9Q5GH70 373 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 C11orf74Q86VG3 221 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 PIGKQ92643 395 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 CXCL16Q9H2A7 254 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 SLKQ9H2G2 1235 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-203ENST00000467533 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-203ENST00000467533 INVSQ9Y283 1065 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 MYO16Q9Y6X6 1858 aa11.31□□□□□ -0.6
HDAC3-203ENST00000467533 TNRC6BQ9UPQ9 1833 aaKnown RBP11.3□□□□□ -0.6
HDAC3-203ENST00000467533 TENM4Q6N022 2769 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 BPTFQ12830 3046 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 A0A1B0GUA9 196 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 EML1O00423 815 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 MEFVO15553 781 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-203ENST00000467533 IGFBP6P24592 240 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-203ENST00000467533 CDC27P30260 824 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 DHPSP49366 369 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-203ENST00000467533 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 PTPAQ15257 358 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 ZNF423Q2M1K9 1284 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 ITPRIPL2Q3MIP1 535 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 TRIM61Q5EBN2 209 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 STXBP5Q5T5C0 1151 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 FSTL4Q6MZW2 842 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 OTUD6AQ7L8S5 288 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 ARID3BQ8IVW6 561 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-203ENST00000467533 CCDC148Q8NFR7 591 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 ETNPPLQ8TBG4 499 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 LXNQ9BS40 222 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 NUSAP1Q9BXS6 441 aaKnown RBP11.3□□□□□ -0.6
HDAC3-203ENST00000467533 XPNPEP1Q9NQW7 623 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 BRPF3Q9ULD4 1205 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 RAXQ9Y2V3 346 aa11.3□□□□□ -0.6
HDAC3-203ENST00000467533 KLF18A0A0U1RQI7 1052 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 H7C4K7 107 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 SLC27A2O14975 620 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 N4BP3O15049 544 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 EGFP01133 1207 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 P4HBP07237 508 aaKnown RBP11.29□□□□□ -0.6
HDAC3-203ENST00000467533 POU5F1BQ06416 359 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 TMEM196Q5HYL7 178 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 TTC22Q5TAA0 569 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 TPGS2Q68CL5 300 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 RAB44Q7Z6P3 723 aaPredicted RBP11.29□□□□□ -0.6
HDAC3-203ENST00000467533 PIP4P1Q86T03 277 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 HDDC3Q8N4P3 179 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 C3orf58Q8NDZ4 430 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 RPLP0P6Q8NHW5 317 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 MDM1Q8TC05 714 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 BPIFB1Q8TDL5 484 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 UROC1Q96N76 676 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 TPSD1Q9BZJ3 242 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 RWDD1Q9H446 243 aaPredicted RBP11.29□□□□□ -0.6
HDAC3-203ENST00000467533 GOLGA2P5Q9HBQ8 144 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 SCUBE2Q9NQ36 999 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 EVLQ9UI08 416 aaPredicted RBP11.29□□□□□ -0.6
HDAC3-203ENST00000467533 GDAQ9Y2T3 454 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 YIPF1Q9Y548 306 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 ADAMTS9Q9P2N4 1935 aa11.29□□□□□ -0.6
HDAC3-203ENST00000467533 TRIP11Q15643 1979 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 LRRIQ4A6NIV6 560 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 CPB1P15086 417 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 ENGP17813 658 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 BCKDHBP21953 392 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 MCM2P49736 904 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 ATXN3P54252 364 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-203ENST00000467533 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-203ENST00000467533 DMC1Q14565 340 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms