RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 FAM109BQ6ICB4 259 aaPredicted RBP15.9■□□□□ 0.14
DDX56-208ENST00000467318 ZNF280BQ86YH2 543 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 COLGALT2Q8IYK4 626 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 C1orf127Q8N9H9 656 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 SP7Q8TDD2 431 aaPredicted RBP15.9■□□□□ 0.14
DDX56-208ENST00000467318 TMEM175Q9BSA9 504 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 NRDE2Q9H7Z3 1164 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 TUBGCP4Q9UGJ1 667 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 PDCD11Q14690 1871 aaKnown RBP15.9■□□□□ 0.14
DDX56-208ENST00000467318 A0A1W2PPC1 479 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 PES1O00541 588 aaKnown RBP15.89■□□□□ 0.13
DDX56-208ENST00000467318 CCP110O43303 1012 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 PHACTR2O75167 634 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 ALDH7A1P49419 539 aaKnown RBP15.89■□□□□ 0.13
DDX56-208ENST00000467318 RBP5P82980 135 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 SOX4Q06945 474 aaPredicted RBP15.89■□□□□ 0.13
DDX56-208ENST00000467318 UPP1Q16831 310 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 CBWD6Q4V339 395 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 CBWD3Q5JTY5 395 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 CBWD5Q5RIA9 395 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 TDRD10Q5VZ19 366 aaKnown RBP15.89■□□□□ 0.13
DDX56-208ENST00000467318 CHRDL2Q6WN34 429 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 APTXQ7Z2E3 356 aaKnown RBP15.89■□□□□ 0.13
DDX56-208ENST00000467318 TMEM130Q8N3G9 435 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 FIBCD1Q8N539 461 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 FAM84AQ96KN4 292 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 VPS16Q9H269 839 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 MMRN2Q9H8L6 949 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 TAB2Q9NYJ8 693 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 COQ4Q9Y3A0 265 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 ANO9A1A5B4 782 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 GTPBP10A4D1E9 387 aaKnown RBP15.89■□□□□ 0.13
DDX56-208ENST00000467318 GRXCR1A8MXD5 290 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 ZC3H11AO75152 810 aaKnown RBP eCLIP15.89■□□□□ 0.13
DDX56-208ENST00000467318 ITGB3P05106 788 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 PAX3P23760 479 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 FANCCQ00597 558 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 TRPC3Q13507 836 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 C9orf57Q5W0N0 161 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 FBXL13Q8NEE6 735 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 CWH43Q9H720 699 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 GOLGA2P5Q9HBQ8 144 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 AAASQ9NRG9 546 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 PCDHA11Q9Y5I1 949 aa15.89■□□□□ 0.13
DDX56-208ENST00000467318 COL4A6Q14031 1691 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 CASTOR2A6NHX0 329 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 PIRO00625 290 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 GALTP07902 379 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 KRT19P08727 400 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 LAG3P18627 525 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 PNPLA4P41247 253 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 CLCNKBP51801 687 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 MYL7Q01449 175 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 NCOA4Q13772 614 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 FKBP15Q5T1M5 1219 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 SPOUT1Q5T280 376 aaKnown RBP15.88■□□□□ 0.13
DDX56-208ENST00000467318 DCLRE1AQ6PJP8 1040 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 LRRC52Q8N7C0 313 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 CXorf38Q8TB03 319 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 CLP1Q92989 425 aaKnown RBP15.88■□□□□ 0.13
DDX56-208ENST00000467318 RAB20Q9NX57 234 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 HCSTQ9UBK5 93 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 DNAJB4Q9UDY4 337 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 SIX4Q9UIU6 781 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 AGAP1Q9UPQ3 857 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 FAN1Q9Y2M0 1017 aa15.88■□□□□ 0.13
DDX56-208ENST00000467318 A0A1B0GTH6 734 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 LGALS16A8MUM7 142 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 TMEM189-UBE2V1I3L0A0 370 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 PODXLO00592 558 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 RIOK3O14730 519 aaKnown RBP15.87■□□□□ 0.13
DDX56-208ENST00000467318 CTIFO43310 598 aaKnown RBP15.87■□□□□ 0.13
DDX56-208ENST00000467318 B3GAT3O94766 335 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 CST3P01034 146 aaPredicted RBP15.87■□□□□ 0.13
DDX56-208ENST00000467318 POLR2BP30876 1174 aaKnown RBP15.87■□□□□ 0.13
DDX56-208ENST00000467318 ATICP31939 592 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 OR1G1P47890 313 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 GUCY2FP51841 1108 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 RABGGTBP53611 331 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 BCAR1P56945 870 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 UBASH3AP57075 661 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 MYO1EQ12965 1108 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 PTPN14Q15678 1187 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 RAB30Q15771 203 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 SGSM1Q2NKQ1 1148 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 TAF4BQ92750 862 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 ZNF560Q96MR9 790 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 COLEC11Q9BWP8 271 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 IMPG2Q9BZV3 1241 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 XPO4Q9C0E2 1151 aaKnown RBP15.87■□□□□ 0.13
DDX56-208ENST00000467318 IFNKQ9P0W0 207 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 RWDD3Q9Y3V2 267 aa15.87■□□□□ 0.13
DDX56-208ENST00000467318 MRPL42Q9Y6G3 142 aaKnown RBP15.87■□□□□ 0.13
DDX56-208ENST00000467318 NRP1O14786 923 aa15.86■□□□□ 0.13
DDX56-208ENST00000467318 B4GALT3O60512 393 aa15.86■□□□□ 0.13
DDX56-208ENST00000467318 VNN1O95497 513 aa15.86■□□□□ 0.13
DDX56-208ENST00000467318 STAU1O95793 577 aaKnown RBP15.86■□□□□ 0.13
DDX56-208ENST00000467318 HLA-DRAP01903 254 aa15.86■□□□□ 0.13
DDX56-208ENST00000467318 PIK3CAP42336 1068 aa15.86■□□□□ 0.13
DDX56-208ENST00000467318 EXOC3L4Q17RC7 722 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms