RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 FAM189BP81408 668 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 SOX4Q06945 474 aaPredicted RBP13.98□□□□□ -0.17
COL4A1-202ENST00000467182 CUL2Q13617 745 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 SGSM1Q2NKQ1 1148 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 WDR44Q5JSH3 913 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 ENOSF1Q7L5Y1 443 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 UBE2Q1Q7Z7E8 422 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 ECHDC2Q86YB7 292 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 TAF4BQ92750 862 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 VWCEQ96DN2 955 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 FAM81BQ96LP2 452 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 PPP1R10Q96QC0 940 aaKnown RBP13.98□□□□□ -0.17
COL4A1-202ENST00000467182 DESI2Q9BSY9 194 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 HAUS4Q9H6D7 363 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 C1orf112Q9NSG2 853 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 NENFQ9UMX5 172 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 CNTN6Q9UQ52 1028 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 GIT1Q9Y2X7 761 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 ADGRG1Q9Y653 693 aa13.98□□□□□ -0.17
COL4A1-202ENST00000467182 SCN1AP35498 2009 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 ANO9A1A5B4 782 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 EIF3CLB5ME19 914 aaKnown RBP13.97□□□□□ -0.17
COL4A1-202ENST00000467182 INPPL1O15357 1258 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 ZNF500O60304 480 aaPredicted RBP13.97□□□□□ -0.17
COL4A1-202ENST00000467182 NDUFA10O95299 355 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 LCA5LO95447 670 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 CYP3A5P20815 502 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 CLCN1P35523 988 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 ASPAP45381 313 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 ARID5AQ03989 594 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 PTK2Q05397 1052 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 KLHL30Q0D2K2 578 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 TRPC3Q13507 836 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 ZNF699Q32M78 642 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 ZNF571Q7Z3V5 609 aaPredicted RBP13.97□□□□□ -0.17
COL4A1-202ENST00000467182 REXO1L1PQ8IX06 675 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 CCDC170Q8IYT3 715 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 CCAR2Q8N163 923 aaKnown RBP13.97□□□□□ -0.17
COL4A1-202ENST00000467182 ACRBPQ8NEB7 543 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 JAKMIP2Q96AA8 810 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 SCLYQ96I15 445 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 ZFP42Q96MM3 310 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 EIF3CQ99613 913 aaKnown RBP13.97□□□□□ -0.17
COL4A1-202ENST00000467182 NIF3L1Q9GZT8 377 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 TSPYL2Q9H2G4 693 aaPredicted RBP13.97□□□□□ -0.17
COL4A1-202ENST00000467182 HIPK3Q9H422 1215 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 UBQLN1Q9UMX0 589 aaKnown RBP13.97□□□□□ -0.17
COL4A1-202ENST00000467182 POLIQ9UNA4 740 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 AGAP1Q9UPQ3 857 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 ATP11BQ9Y2G3 1177 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 EPN1Q9Y6I3 576 aaPredicted RBP13.97□□□□□ -0.17
COL4A1-202ENST00000467182 ALPK3Q96L96 1907 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 TET1Q8NFU7 2136 aa13.97□□□□□ -0.17
COL4A1-202ENST00000467182 A0A0U1RQJ8 604 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 ARL5CA6NH57 179 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 PIRO00625 290 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 KRT19P08727 400 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 SKIP12755 728 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 TBXAS1P24557 533 aaPredicted RBP13.96□□□□□ -0.17
COL4A1-202ENST00000467182 MSNP26038 577 aaKnown RBP13.96□□□□□ -0.17
COL4A1-202ENST00000467182 LRPAP1P30533 357 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 ATICP31939 592 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 CYP2C18P33260 490 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 MLH1P40692 756 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 RBP5P82980 135 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 C9orf57Q5W0N0 161 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 NECAB2Q7Z6G3 386 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 DBF4BQ8NFT6 615 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 BEST2Q8NFU1 509 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 ATRIPQ8WXE1 791 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 FAXDC2Q96IV6 333 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 GAD1Q99259 594 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 TMEM106CQ9BVX2 250 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 FTHL17Q9BXU8 183 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 BCO2Q9BYV7 579 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 PPP1R12CQ9BZL4 782 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 SPTLC3Q9NUV7 552 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 PPP2R2CQ9Y2T4 447 aa13.96□□□□□ -0.17
COL4A1-202ENST00000467182 TDRD15B5MCY1 1934 aaKnown RBP13.96□□□□□ -0.18
COL4A1-202ENST00000467182 LTBP2Q14767 1821 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 ENPP3O14638 875 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 CLTBP09497 229 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 KIF11P52732 1056 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 ZNF132P52740 706 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 CCL23P55773 120 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 TDRD12Q587J7 1177 aaKnown RBP13.95□□□□□ -0.18
COL4A1-202ENST00000467182 SMYD5Q6GMV2 418 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 FAM43BQ6ZT52 329 aaPredicted RBP13.95□□□□□ -0.18
COL4A1-202ENST00000467182 SLC24A5Q71RS6 500 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 FMNL3Q8IVF7 1028 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 HACE1Q8IYU2 909 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 CRIPAKQ8N1N5 446 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 LRRC52Q8N7C0 313 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 SLC30A5Q8TAD4 765 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 LNX1Q8TBB1 728 aaPredicted RBP13.95□□□□□ -0.18
COL4A1-202ENST00000467182 PGBD4Q96DM1 585 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 HPDLQ96IR7 371 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 PPP1R13BQ96KQ4 1090 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 CCDC42Q96M95 316 aa13.95□□□□□ -0.18
COL4A1-202ENST00000467182 IMPG2Q9BZV3 1241 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms