RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 LILRB2Q8N423 598 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 SMC1BQ8NDV3 1235 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 SLC30A5Q8TAD4 765 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 LPIN2Q92539 896 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 C8orf37Q96NL8 207 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.43□□□□□ -1.54
XRN1-206ENST00000467077 SPTLC3Q9NUV7 552 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 IGKV2D-30A0A075B6S6 120 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 CCDC187A0A096LP49 1063 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 PRAMEF33A0A0G2JMD5 474 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 CDHR4A6H8M9 788 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 MYMKA6NI61 221 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 PRAMEF10O60809 474 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 IL2P60568 153 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 RPS7P62081 194 aaKnown RBP5.42□□□□□ -1.54
XRN1-206ENST00000467077 FPGSQ05932 587 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 PABPC4Q13310 644 aaKnown RBP eCLIP5.42□□□□□ -1.54
XRN1-206ENST00000467077 CT83Q5H943 113 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 TSHZ1Q6ZSZ6 1077 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 Q6ZVL8 140 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 SEM1Q6ZVN7 128 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 MYCBPAPQ8TBZ2 947 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 STON2Q8WXE9 905 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 EBF3Q9H4W6 596 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 MTMR4Q9NYA4 1195 aa5.42□□□□□ -1.54
XRN1-206ENST00000467077 NOC2LQ9Y3T9 749 aaKnown RBP5.42□□□□□ -1.54
XRN1-206ENST00000467077 WNT10BO00744 389 aa5.41□□□□□ -1.54
XRN1-206ENST00000467077 RFPL3O75679 317 aa5.41□□□□□ -1.54
XRN1-206ENST00000467077 LATS1O95835 1130 aa5.41□□□□□ -1.54
XRN1-206ENST00000467077 TOP3BO95985 862 aaKnown RBP5.41□□□□□ -1.54
XRN1-206ENST00000467077 GUCY1A2P33402 732 aa5.41□□□□□ -1.54
XRN1-206ENST00000467077 LSSP48449 732 aa5.41□□□□□ -1.54
XRN1-206ENST00000467077 UGT8Q16880 541 aa5.41□□□□□ -1.54
XRN1-206ENST00000467077 ZNF66Q6ZN08 573 aa5.41□□□□□ -1.54
XRN1-206ENST00000467077 CAMKK1Q8N5S9 505 aa5.41□□□□□ -1.54
XRN1-206ENST00000467077 AJAP1Q9UKB5 411 aaPredicted RBP5.41□□□□□ -1.54
XRN1-206ENST00000467077 NEU2Q9Y3R4 380 aa5.41□□□□□ -1.54
XRN1-206ENST00000467077 FAM83GA6ND36 823 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 CYSRT1A8MQ03 144 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 PPP6CO00743 305 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 HNRNPCP07910 306 aaKnown RBP eCLIP5.4□□□□□ -1.54
XRN1-206ENST00000467077 CCKARP32238 428 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 CDK17Q00537 523 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 SUPT20HL1Q3ZLR7 823 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 PXDC1Q5TGL8 231 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 KIAA1161Q6NSJ0 714 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 B3GALNT2Q8NCR0 500 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 TBC1D15Q8TC07 691 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 CASKIN2Q8WXE0 1202 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 VPS16Q9H269 839 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 LDAHQ9H6V9 325 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 TUBA8Q9NY65 449 aaPredicted RBP5.4□□□□□ -1.54
XRN1-206ENST00000467077 SLC23A1Q9UHI7 598 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 DPP7Q9UHL4 492 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 ZNF112Q9UJU3 913 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 EDARQ9UNE0 448 aa5.4□□□□□ -1.54
XRN1-206ENST00000467077 TARM1B6A8C7 271 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 PPP1R12AO14974 1030 aaPredicted RBP5.39□□□□□ -1.55
XRN1-206ENST00000467077 CYP2D6P10635 497 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 FCER1AP12319 257 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 KCNA2P16389 499 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 NR4A2P43354 598 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 SLFN5Q08AF3 891 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.39□□□□□ -1.55
XRN1-206ENST00000467077 SOGA3Q5TF21 947 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 BROXQ5VW32 411 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 SLC2A7Q6PXP3 512 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 Q8NA96 180 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 EAF2Q96CJ1 260 aaPredicted RBP5.39□□□□□ -1.55
XRN1-206ENST00000467077 RAX2Q96IS3 184 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 MYOCQ99972 504 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 GSTO2Q9H4Y5 243 aa5.39□□□□□ -1.55
XRN1-206ENST00000467077 EBLN1P0CF75 366 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 FPR1P21462 350 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 DRD4P21917 467 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 CCT8P50990 548 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 NXPH1P58417 271 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 CCT2P78371 535 aaKnown RBP5.38□□□□□ -1.55
XRN1-206ENST00000467077 ITIH3Q06033 890 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 PBKQ96KB5 322 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 SH2D3AQ9BRG2 576 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 QTRT1Q9BXR0 403 aaKnown RBP5.38□□□□□ -1.55
XRN1-206ENST00000467077 SPRTNQ9H040 489 aaPredicted RBP5.38□□□□□ -1.55
XRN1-206ENST00000467077 SERGEFQ9UGK8 458 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 ZBTB21Q9ULJ3 1066 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 ACTL7AQ9Y615 435 aa5.38□□□□□ -1.55
XRN1-206ENST00000467077 ASMTLO95671 621 aa5.37□□□□□ -1.55
XRN1-206ENST00000467077 POU3F2P20265 443 aaPredicted RBP5.37□□□□□ -1.55
XRN1-206ENST00000467077 GATA3P23771 443 aa5.37□□□□□ -1.55
XRN1-206ENST00000467077 ATP2B3Q16720 1220 aa5.37□□□□□ -1.55
XRN1-206ENST00000467077 OR2W6PQ8NHA6 318 aa5.37□□□□□ -1.55
XRN1-206ENST00000467077 SNX19Q92543 992 aa5.37□□□□□ -1.55
XRN1-206ENST00000467077 SLC5A5Q92911 643 aa5.37□□□□□ -1.55
XRN1-206ENST00000467077 RBM12Q9NTZ6 932 aaKnown RBP5.37□□□□□ -1.55
XRN1-206ENST00000467077 CDYLQ9Y232 598 aa5.37□□□□□ -1.55
XRN1-206ENST00000467077 RUVBL1Q9Y265 456 aaKnown RBP5.37□□□□□ -1.55
XRN1-206ENST00000467077 NR2E3Q9Y5X4 410 aa5.37□□□□□ -1.55
XRN1-206ENST00000467077 KIAA0391O15091 583 aaKnown RBP5.36□□□□□ -1.55
XRN1-206ENST00000467077 ENDOD1O94919 500 aa5.36□□□□□ -1.55
XRN1-206ENST00000467077 TUBB4AP04350 444 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms