RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 PROSER1Q86XN7 944 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 SYT12Q8IV01 421 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 OTUD7AQ8TE49 926 aaPredicted RBP6.27□□□□□ -1.41
CXXC4-202ENST00000466963 IFT74Q96LB3 600 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 POLR3CQ9BUI4 534 aaPredicted RBP6.27□□□□□ -1.41
CXXC4-202ENST00000466963 GPR62Q9BZJ7 368 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 OSGEPQ9NPF4 335 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 OTOGLQ3ZCN5 2332 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 A0A0A0MRY4 1105 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 M0QZQ0 153 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 PAPSS1O43252 624 aaPredicted RBP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 ZNF217O75362 1048 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 RFPL2O75678 378 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 TNFRSF4P43489 277 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 SCNN1GP51170 649 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 SEMA3BQ13214 749 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 RNF149Q8NC42 400 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 SPPL2BQ8TCT7 592 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 AUTS2Q8WXX7 1259 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 TRMT2BQ96GJ1 504 aaKnown RBP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 NLRP4Q96MN2 994 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 IRX2Q9BZI1 471 aaPredicted RBP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 CCSER1Q9C0I3 900 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 GBP3Q9H0R5 595 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 POLMQ9NP87 494 aaPredicted RBP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 SLC6A14Q9UN76 642 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 V9GY48 417 aaPredicted RBP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 SHISA7A6NL88 538 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 HEPACAM2A8MVW5 462 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 SLC27A2O14975 620 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 ATXN7O15265 892 aaPredicted RBP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 WEE2P0C1S8 567 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 MARCKSP29966 332 aaPredicted RBP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 MLH1P40692 756 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 AARSP49588 968 aaKnown RBP eCLIP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 GPR17Q13304 367 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 UPP1Q16831 310 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 ANO5Q75V66 913 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 PDZD3Q86UT5 571 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 PALB2Q86YC2 1186 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 ATP2A3Q93084 1043 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 PSMG2Q969U7 264 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 KXD1Q9BQD3 176 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 DUSP15Q9H1R2 295 aaPredicted RBP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 PKD2L1Q9P0L9 805 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 CNTN3Q9P232 1028 aa6.26□□□□□ -1.41
CXXC4-202ENST00000466963 DDX25Q9UHL0 483 aaKnown RBP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 PRG3Q9Y2Y8 225 aaPredicted RBP6.26□□□□□ -1.41
CXXC4-202ENST00000466963 A0A087WV48 116 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 CCDC194A0A1B0GVG4 234 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 CCL16O15467 120 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 POMCP01189 267 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 CAPNS1P04632 268 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 PDE4CQ08493 712 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 SFSWAPQ12872 951 aaKnown RBP6.25□□□□□ -1.41
CXXC4-202ENST00000466963 NAB2Q15742 525 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 TANGO2Q6ICL3 276 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 NEK8Q86SG6 692 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 BLIDQ8IZY5 108 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 ZNF274Q96GC6 653 aaPredicted RBP6.25□□□□□ -1.41
CXXC4-202ENST00000466963 ARRDC1-AS1Q9H2J1 176 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 FBRSQ9HAH7 460 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 HEBP1Q9NRV9 189 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 HCSTQ9UBK5 93 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 VAV3Q9UKW4 847 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 TEX51A0A1B0GUA7 166 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 DKK1O94907 266 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 CYP11A1P05108 521 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 SERPINF2P08697 491 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 ARF4P18085 180 aaPredicted RBP6.25□□□□□ -1.41
CXXC4-202ENST00000466963 SP100P23497 879 aaPredicted RBP6.25□□□□□ -1.41
CXXC4-202ENST00000466963 OR1D2P34982 312 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 ROR1Q01973 937 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 SUZ12Q15022 739 aaKnown RBP6.25□□□□□ -1.41
CXXC4-202ENST00000466963 RTP2Q5QGT7 225 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 CREB3L3Q68CJ9 461 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 GSTCDQ8NEC7 633 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 ITFG1Q8TB96 612 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 FOXJ1Q92949 421 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 LPPQ93052 612 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 GRAMD1AQ96CP6 724 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 TICRRQ7Z2Z1 1910 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 UNC80Q8N2C7 3258 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 M0R2N6 131 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 GFRA2O00451 464 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 AP5Z1O43299 807 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 OPHN1O60890 802 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 NFATC1O95644 943 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 ADRB2P07550 413 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 CEBPBP17676 345 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 MLLT3P42568 568 aaPredicted RBP6.25□□□□□ -1.41
CXXC4-202ENST00000466963 PRPF4BQ13523 1007 aaKnown RBP6.25□□□□□ -1.41
CXXC4-202ENST00000466963 XKR9Q5GH70 373 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 HAUS3Q68CZ6 603 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 ALKAL1Q6UXT8 129 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 ZPBP2Q6X784 338 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 DCP1BQ8IZD4 617 aaKnown RBP6.25□□□□□ -1.41
CXXC4-202ENST00000466963 WHAMMQ8TF30 809 aa6.25□□□□□ -1.41
CXXC4-202ENST00000466963 CCDC86Q9H6F5 360 aaKnown RBP6.25□□□□□ -1.41
CXXC4-202ENST00000466963 PARP2Q9UGN5 583 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms