RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 C9orf57Q5W0N0 161 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 ANKRD54Q6NXT1 300 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 LILRA6Q6PI73 481 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 CBWD2Q8IUF1 395 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 NELFCDQ8IXH7 590 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 XXYLT1Q8NBI6 393 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 SMRP1Q8NCR6 262 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 BEST2Q8NFU1 509 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 HASPINQ8TF76 798 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 CASP10Q92851 521 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 GTPBP4Q9BZE4 634 aaKnown RBP10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 PCIF1Q9H4Z3 704 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 RMND1Q9NWS8 449 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 HOOK1Q9UJC3 728 aaKnown RBP10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 BACE2Q9Y5Z0 518 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 HCFC2Q9Y5Z7 792 aa10.27□□□□□ -0.77
SDCCAG3-208ENST00000466579 TSC2P49815 1807 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 GOLGA8IPA6NC78 632 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 GRXCR2A6NFK2 248 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 GOLGA8JA6NMD2 632 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 H3BQ06 376 aaPredicted RBP10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 CLIC2O15247 247 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 KINO60870 393 aaKnown RBP10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 SMC2O95347 1197 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 ADH1AP07327 375 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 SRGAP2BP0DMP2 458 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 BRCC3P46736 316 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 NDUFV1P49821 464 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 GUCY2FP51841 1108 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 LILRA4P59901 499 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 RBM10P98175 930 aaKnown RBP10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 CYP24A1Q07973 514 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 SMAD4Q13485 552 aaKnown RBP10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 PSMD6Q15008 389 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 SURF1Q15526 300 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 SNRNP35Q16560 246 aaKnown RBP10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 TPRNQ4KMQ1 711 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 ZNF658Q5TYW1 1059 aaPredicted RBP10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 KIAA1841Q6NSI8 718 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 SYCE2Q6PIF2 218 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 TMEM130Q8N3G9 435 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 HDAC7Q8WUI4 952 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 RIN2Q8WYP3 895 aaPredicted RBP10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 SUSD6Q92537 303 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 BORCS6Q96GS4 357 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 B3GALT6Q96L58 329 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 MFSD14AQ96MC6 490 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 CLSTN3Q9BQT9 956 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 RHOBTB2Q9BYZ6 727 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 GZF1Q9H116 711 aaPredicted RBP10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 S1PR5Q9H228 398 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 DZANK1Q9NVP4 752 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 DPP3Q9NY33 737 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 MTRRQ9UBK8 725 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 CD207Q9UJ71 328 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 BARX2Q9UMQ3 279 aaPredicted RBP10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 PCDHB8Q9UN66 801 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 PCDHA5Q9Y5H7 936 aa10.26□□□□□ -0.77
SDCCAG3-208ENST00000466579 C2CD2LO14523 706 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 PPEF2O14830 753 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 MAPK13O15264 365 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 MBTPS2O43462 519 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 OAZ2O95190 189 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 NR3C1P04150 777 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 CYP11A1P05108 521 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 EPCAMP16422 314 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 TKTP29401 623 aaKnown RBP10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 KCNQ1P51787 676 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 CLDN10P78369 228 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 ENPEPQ07075 957 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 RAB33AQ14088 237 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 SMAD2Q15796 467 aaKnown RBP10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 PSMD5Q16401 504 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 SLC8B1Q6J4K2 584 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 PRSS55Q6UWB4 352 aaPredicted RBP10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 ANKS3Q6ZW76 656 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 WDR49Q8IV35 697 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 ZC3H3Q8IXZ2 948 aaKnown RBP10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 C1orf127Q8N9H9 656 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 CMASQ8NFW8 434 aaPredicted RBP10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 CACTINQ8WUQ7 758 aaKnown RBP10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 SMARCE1Q969G3 411 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 FAM212AQ96EL1 285 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 PDE11AQ9HCR9 933 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 INTS13Q9NVM9 706 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 ITGA11Q9UKX5 1188 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 PTPRJQ12913 1337 aa10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 TCF20Q9UGU0 1960 aaKnown RBP10.25□□□□□ -0.77
SDCCAG3-208ENST00000466579 C5orf42Q9H799 3197 aa10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 DENND4AQ7Z401 1863 aa10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 I3L4J1 428 aa10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 SPTLC1O15269 473 aa10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 ADAM12O43184 909 aa10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 CALUO43852 315 aaPredicted RBP10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 PRPF40AO75400 957 aaKnown RBP10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 TYMPP19971 482 aa10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 KLRC2P26717 231 aa10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 MCM4P33991 863 aa10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 PNPLA4P41247 253 aa10.24□□□□□ -0.77
SDCCAG3-208ENST00000466579 CYP2J2P51589 502 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms