RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ZNF543Q08ER8 600 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 KRT72Q14CN4 511 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 ATXN7L2Q5T6C5 722 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 ANKS6Q68DC2 871 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 EFCAB12Q6NXP0 572 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 ZNF365Q70YC5 407 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 SIAH1Q8IUQ4 282 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 ST8SIA2Q92186 375 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 SGCZQ96LD1 299 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 LRRC37BQ96QE4 947 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 ARPC5LQ9BPX5 153 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 COLEC11Q9BWP8 271 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 PLA2G12BQ9BX93 195 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 SIK2Q9H0K1 926 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 GSTO2Q9H4Y5 243 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 PLCB1Q9NQ66 1216 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 RGS17Q9UGC6 210 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 DMTF1Q9Y222 760 aa5.37□□□□□ -1.55
CDC42BPA-211ENST00000466538 TRIM13O60858 407 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 STC2O76061 302 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 HAUS5O94927 633 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 AHSGP02765 367 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 GNAI2P04899 355 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 GJB1P08034 283 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 RARBP10826 455 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 KCNJ5P48544 419 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 DAG1Q14118 895 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 DGKKQ5KSL6 1271 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 ZFYVE27Q5T4F4 411 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 C10orf62Q5T681 223 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 ZNF783Q6ZMS7 281 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 OR2C3Q8N628 320 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 FITM2Q8N6M3 262 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 GIMAP8Q8ND71 665 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 MDGA1Q8NFP4 955 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 TFAP2CQ92754 450 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 SCAMP4Q969E2 229 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 CPPED1Q9BRF8 314 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 LSM14BQ9BX40 385 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 MEGF9Q9H1U4 602 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 GPR35Q9HC97 309 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 PNPLA8Q9NP80 782 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 CPNE7Q9UBL6 633 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 AFF4Q9UHB7 1163 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 SLC30A1Q9Y6M5 507 aa5.36□□□□□ -1.55
CDC42BPA-211ENST00000466538 ABHD14A-ACY1A0A1B0GW23 586 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 NPEPPSL1A6NEC2 478 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 BTN3A1O00481 513 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 RAD17O75943 681 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 CHEK2O96017 543 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 NOMO3P69849 1222 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 EXOSC9Q06265 439 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 FAM214AQ32MH5 1076 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 AMOTQ4VCS5 1084 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 SLC44A4Q53GD3 710 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 UTP14CQ5TAP6 766 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 IZUMO3Q5VZ72 239 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 UBE3BQ7Z3V4 1068 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 SESTD1Q86VW0 696 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 C1QL4Q86Z23 238 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 ANKRD35Q8N283 1001 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 RIPOR3Q96MK2 946 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 ZNF518BQ9C0D4 1074 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 ARFGAP3Q9NP61 516 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 SERHLQ9NQF3 203 aa5.35□□□□□ -1.55
CDC42BPA-211ENST00000466538 ZNF536O15090 1300 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 TRIM43BA6NCK2 446 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 KPNA5O15131 536 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 ABHD16AO95870 558 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 PLATP00750 562 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 TNFSF4P23510 183 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 SLC6A4P31645 630 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 STT3AP46977 705 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 RAP2BP61225 183 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 POU6F2P78424 691 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 HHEXQ03014 270 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 ELAVL1Q15717 326 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 DCAF17Q5H9S7 520 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 FAM209BQ5JX69 171 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 LMBRD2Q68DH5 695 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 C1orf228Q6PIY5 440 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 TSHZ1Q6ZSZ6 1077 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 XYLT1Q86Y38 959 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 GSPT2Q8IYD1 628 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 SDR16C5Q8N3Y7 309 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 OR52N2Q8NGI0 321 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 TRIM43Q96BQ3 446 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 MIEF2Q96C03 454 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 TMEM176AQ96HP8 235 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 OR14A2Q96R54 314 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 P2RX7Q99572 595 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 BRIP1Q9BX63 1249 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 SPON1Q9HCB6 807 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 SLAMF7Q9NQ25 335 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 SACM1LQ9NTJ5 587 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 TRMT13Q9NUP7 481 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 FBXO34Q9NWN3 711 aa5.34□□□□□ -1.55
CDC42BPA-211ENST00000466538 PPP4R1LQ9P1A2 415 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms