RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 CXCL10P02778 98 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 THP07101 528 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 RAG1P15918 1043 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 CYP3A5P20815 502 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 FECHP22830 423 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 SCNN1GP51170 649 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 TNNC1P63316 161 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 CDK17Q00537 523 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 GLB1LQ6UWU2 654 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 SCARA5Q6ZMJ2 495 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 AGMOQ6ZNB7 445 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 VPS36Q86VN1 386 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 URGCPQ8TCY9 931 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 LINC01599Q8WXQ3 324 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 KAT5Q92993 513 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 C18orf25Q96B23 403 aaPredicted RBP13.03□□□□□ -0.32
VPS16-206ENST00000466415 ELMO3Q96BJ8 720 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 HPDLQ96IR7 371 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 ZFP42Q96MM3 310 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 KREMEN1Q96MU8 473 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 APOBEC3GQ9HC16 384 aaKnown RBP13.03□□□□□ -0.32
VPS16-206ENST00000466415 RNF19AQ9NV58 838 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 AIPL1Q9NZN9 384 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 NXF1Q9UBU9 619 aaKnown RBP13.03□□□□□ -0.32
VPS16-206ENST00000466415 PRKAG2Q9UGJ0 569 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 PYCARDQ9ULZ3 195 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 INPP5FQ9Y2H2 1132 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 BZW2Q9Y6E2 419 aaKnown RBP13.03□□□□□ -0.32
VPS16-206ENST00000466415 CITO14578 2027 aa13.03□□□□□ -0.32
VPS16-206ENST00000466415 MEIS3P2A8K0S8 358 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 C9IYK1 514 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 RBAK-RBAKDNI3L0D1 243 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 PTGESO14684 152 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 CCP110O43303 1012 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 EVI5O60447 810 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 PNMA6AP0CW24 399 aaPredicted RBP13.02□□□□□ -0.33
VPS16-206ENST00000466415 PNPLA4P41247 253 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 GRIK3Q13003 919 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 ZBTB6Q15916 424 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 E4F1Q66K89 784 aaPredicted RBP13.02□□□□□ -0.33
VPS16-206ENST00000466415 CNKSR3Q6P9H4 555 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 WDR59Q6PJI9 974 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 ABI1Q8IZP0 508 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 LRRC52Q8N7C0 313 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 SHC3Q92529 594 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 JAKMIP2Q96AA8 810 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 PPP1R10Q96QC0 940 aaKnown RBP13.02□□□□□ -0.33
VPS16-206ENST00000466415 CHP1Q99653 195 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 CXCL16Q9H2A7 254 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 NHEJ1Q9H9Q4 299 aaPredicted RBP13.02□□□□□ -0.33
VPS16-206ENST00000466415 TMEM161AQ9NX61 479 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 PCDHB7Q9Y5E2 793 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 PCDHB4Q9Y5E5 795 aa13.02□□□□□ -0.33
VPS16-206ENST00000466415 SSU72P8A0A1W2PR75 194 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 FOXN3O00409 490 aaPredicted RBP13.01□□□□□ -0.33
VPS16-206ENST00000466415 KIAA0355O15063 1070 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 HOXA2O43364 376 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 AKR1B10O60218 316 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
VPS16-206ENST00000466415 TIMP1P01033 207 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 EIF4A3P38919 411 aaKnown RBP13.01□□□□□ -0.33
VPS16-206ENST00000466415 KCNJ6P48051 423 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 PDE6CP51160 858 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 GPNMBQ14956 572 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 WDR72Q3MJ13 1102 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 SV2CQ496J9 727 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 C9orf57Q5W0N0 161 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 RAD9BQ6WBX8 426 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 ZNF598Q86UK7 904 aaKnown RBP13.01□□□□□ -0.33
VPS16-206ENST00000466415 RTN4RL1Q86UN2 441 aaPredicted RBP13.01□□□□□ -0.33
VPS16-206ENST00000466415 TMEM199Q8N511 208 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 FAXDC2Q96IV6 333 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 ARID3AQ99856 593 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.01□□□□□ -0.33
VPS16-206ENST00000466415 GPR88Q9GZN0 384 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 XYLT2Q9H1B5 865 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 HAUS4Q9H6D7 363 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 ELAC1Q9H777 363 aaKnown RBP13.01□□□□□ -0.33
VPS16-206ENST00000466415 VRTNQ9H8Y1 702 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 ARHGAP20Q9P2F6 1191 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 POLIQ9UNA4 740 aa13.01□□□□□ -0.33
VPS16-206ENST00000466415 ESPNB1AK53 854 aa13□□□□□ -0.33
VPS16-206ENST00000466415 ENPP3O14638 875 aa13□□□□□ -0.33
VPS16-206ENST00000466415 ZSCAN12O43309 604 aa13□□□□□ -0.33
VPS16-206ENST00000466415 POMCP01189 267 aa13□□□□□ -0.33
VPS16-206ENST00000466415 PLEKP08567 350 aaPredicted RBP13□□□□□ -0.33
VPS16-206ENST00000466415 CCDC175P0C221 793 aa13□□□□□ -0.33
VPS16-206ENST00000466415 CD58P19256 250 aa13□□□□□ -0.33
VPS16-206ENST00000466415 ANXA13P27216 316 aa13□□□□□ -0.33
VPS16-206ENST00000466415 LRPAP1P30533 357 aa13□□□□□ -0.33
VPS16-206ENST00000466415 PRKCIP41743 596 aa13□□□□□ -0.33
VPS16-206ENST00000466415 ASPAP45381 313 aa13□□□□□ -0.33
VPS16-206ENST00000466415 TAF6P49848 677 aa13□□□□□ -0.33
VPS16-206ENST00000466415 KIF11P52732 1056 aa13□□□□□ -0.33
VPS16-206ENST00000466415 BPIFB4P59827 614 aa13□□□□□ -0.33
VPS16-206ENST00000466415 FAM189BP81408 668 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms