RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 TMEM62Q0P6H9 643 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 PRPF4BQ13523 1007 aaKnown RBP7.58□□□□□ -1.2
CLDN4-204ENST00000466411 GIT2Q14161 759 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 SPECC1Q5M775 1068 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 SLC27A1Q6PCB7 646 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 ZPBP2Q6X784 338 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 KRBA2Q6ZNG9 492 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 UNC13DQ70J99 1090 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 SCUBE3Q8IX30 993 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 MYCT1Q8N699 235 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 LRRN4Q8WUT4 740 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 LINC01599Q8WXQ3 324 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 GATA6Q92908 595 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 BBC3Q96PG8 261 aaPredicted RBP7.58□□□□□ -1.2
CLDN4-204ENST00000466411 GSDMAQ96QA5 445 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 TSPAN18Q96SJ8 248 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 FDXACB1Q9BRP7 624 aaPredicted RBP7.58□□□□□ -1.2
CLDN4-204ENST00000466411 RUSC1Q9BVN2 902 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 MRPL9Q9BYD2 267 aaKnown RBP7.58□□□□□ -1.2
CLDN4-204ENST00000466411 MRPL4Q9BYD3 311 aaKnown RBP7.58□□□□□ -1.2
CLDN4-204ENST00000466411 TRIM6Q9C030 488 aaPredicted RBP7.58□□□□□ -1.2
CLDN4-204ENST00000466411 TMEM206Q9H813 350 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 RGS18Q9NS28 235 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 EXOC1Q9NV70 894 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 ARHGAP28Q9P2N2 729 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 FBXO4Q9UKT5 387 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 LRFN2Q9ULH4 789 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 ST3GAL5Q9UNP4 418 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 PIN4Q9Y237 131 aaKnown RBP7.58□□□□□ -1.2
CLDN4-204ENST00000466411 SIT1Q9Y3P8 196 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 FREM2Q5SZK8 3169 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 MIA3Q5JRA6 1907 aa7.58□□□□□ -1.2
CLDN4-204ENST00000466411 A0A0U1RQF3 1178 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 HIDE1A8MVS5 230 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 K7ENM7 598 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 HNRNPDLO14979 420 aaKnown RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 TBC1D4O60343 1298 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 ZNF623O75123 536 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 LRRN2O75325 713 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 PRKCBP05771 671 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 IDEP14735 1019 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 CD52P31358 61 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 MTHFRP42898 656 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 SARSP49591 514 aaKnown RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 NDUFA8P51970 172 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 PEX3P56589 373 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 GTF2BQ00403 316 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 MBTD1Q05BQ5 628 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 SPEM2Q0P670 501 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 NFX1Q12986 1120 aaKnown RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 STIM1Q13586 685 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 DHX8Q14562 1220 aaKnown RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 KCNB1Q14721 858 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 POSTNQ15063 836 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 ARSHQ5FYA8 562 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 TWF2Q6IBS0 349 aaKnown RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 SLFN12LQ6IEE8 588 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 PDE12Q6L8Q7 609 aaKnown RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 KIAA1841Q6NSI8 718 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 LLGL2Q6P1M3 1020 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 BRICD5Q6PL45 260 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 PRR23BQ6ZRT6 265 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 USP49Q70CQ1 688 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 KCNK18Q7Z418 384 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 FAM228AQ86W67 206 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 NPAS4Q8IUM7 802 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 ABI1Q8IZP0 508 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 FMR1NBQ8N0W7 255 aaPredicted RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 ADAM32Q8TC27 787 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 MICAL1Q8TDZ2 1067 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 DDX1Q92499 740 aaKnown RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 SECISBP2LQ93073 1101 aaKnown RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 SYAP1Q96A49 352 aaPredicted RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 PLIN2Q99541 437 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 SH2D3AQ9BRG2 576 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 FZD8Q9H461 694 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 MRPL44Q9H9J2 332 aaKnown RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 TOPORSQ9NS56 1045 aaPredicted RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 PANK4Q9NVE7 773 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 TMEM161AQ9NX61 479 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 KANSL3Q9P2N6 904 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 FBXL21Q9UKT6 434 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 NOC2LQ9Y3T9 749 aaKnown RBP7.57□□□□□ -1.2
CLDN4-204ENST00000466411 C2orf16Q68DN1 1984 aa7.57□□□□□ -1.2
CLDN4-204ENST00000466411 MYO18BQ8IUG5 2567 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 A0A1B0GUA9 196 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 TMEM8BA6NDV4 472 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 LRP3O75074 770 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 NR1I2O75469 434 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 TOM1L1O75674 476 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 LDHAP00338 332 aaKnown RBP7.56□□□□□ -1.2
CLDN4-204ENST00000466411 PIGRP01833 764 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 MAPK7Q13164 816 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 DRP2Q13474 957 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 FAM26FQ5R3K3 315 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 CES5AQ6NT32 575 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 MAEAQ7L5Y9 396 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 HS2ST1Q7LGA3 356 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 HAUS6Q7Z4H7 955 aa7.56□□□□□ -1.2
CLDN4-204ENST00000466411 USP37Q86T82 979 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms