RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 VSTM1Q6UX27 236 aa20.6■□□□□ 0.89
LIMS2-212ENST00000466410 CRELD2Q6UXH1 353 aaPredicted RBP20.6■□□□□ 0.89
LIMS2-212ENST00000466410 ANKS1BQ7Z6G8 1248 aa20.6■□□□□ 0.89
LIMS2-212ENST00000466410 SCLT1Q96NL6 688 aa20.6■□□□□ 0.89
LIMS2-212ENST00000466410 TRAIPQ9BWF2 469 aa20.6■□□□□ 0.89
LIMS2-212ENST00000466410 AGO2Q9UKV8 859 aaKnown RBP20.6■□□□□ 0.89
LIMS2-212ENST00000466410 THAP12O43422 761 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 GJC1P36383 396 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 NOMO3P69849 1222 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 ZBTB41Q5SVQ8 909 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 CIAPIN1Q6FI81 312 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 TMEM270Q6UE05 265 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 ABHD15Q6UXT9 468 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 NSUN6Q8TEA1 469 aaKnown RBP20.59■□□□□ 0.89
LIMS2-212ENST00000466410 TMEM143Q96AN5 459 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 KIAA1586Q9HCI6 787 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 NINJ2Q9NZG7 142 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 ADAM22Q9P0K1 906 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 COL11A1P12107 1806 aaPredicted RBP20.59■□□□□ 0.89
LIMS2-212ENST00000466410 PARP14Q460N5 1801 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 ZNF541Q9H0D2 1346 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 MYH9P35579 1960 aaKnown RBP20.59■□□□□ 0.89
LIMS2-212ENST00000466410 GJB6O95452 261 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 PTP4A2Q12974 167 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 XRCC4Q13426 336 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 MAMLD1Q13495 774 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 PRUNE1Q86TP1 453 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 REPS2Q8NFH8 660 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 DYDC1Q8WWB3 177 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 SGSM3Q96HU1 749 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 MLXIPLQ9NP71 852 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 USTQ9Y2C2 406 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 PCDHB4Q9Y5E5 795 aa20.59■□□□□ 0.89
LIMS2-212ENST00000466410 FDX1P10109 184 aa20.58■□□□□ 0.89
LIMS2-212ENST00000466410 CD58P19256 250 aa20.58■□□□□ 0.89
LIMS2-212ENST00000466410 CUL2Q13617 745 aa20.58■□□□□ 0.89
LIMS2-212ENST00000466410 LIN9Q5TKA1 542 aa20.58■□□□□ 0.89
LIMS2-212ENST00000466410 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.58■□□□□ 0.89
LIMS2-212ENST00000466410 RHOT1Q8IXI2 618 aa20.58■□□□□ 0.89
LIMS2-212ENST00000466410 ABRAQ8N0Z2 381 aa20.58■□□□□ 0.89
LIMS2-212ENST00000466410 OSBPL8Q9BZF1 889 aa20.58■□□□□ 0.89
LIMS2-212ENST00000466410 CD2APQ9Y5K6 639 aa20.58■□□□□ 0.89
LIMS2-212ENST00000466410 DNAJC8O75937 253 aaPredicted RBP20.58■□□□□ 0.88
LIMS2-212ENST00000466410 BAG6P46379 1132 aa20.58■□□□□ 0.88
LIMS2-212ENST00000466410 TNFAIP1Q13829 316 aa20.58■□□□□ 0.88
LIMS2-212ENST00000466410 MPP2Q14168 576 aa20.58■□□□□ 0.88
LIMS2-212ENST00000466410 EMC2Q15006 297 aa20.58■□□□□ 0.88
LIMS2-212ENST00000466410 CCNG2Q16589 344 aa20.58■□□□□ 0.88
LIMS2-212ENST00000466410 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.58■□□□□ 0.88
LIMS2-212ENST00000466410 PSTPIP1O43586 416 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 SNX3O60493 162 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 GNA15P30679 374 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 SSR1P43307 286 aaKnown RBP20.57■□□□□ 0.88
LIMS2-212ENST00000466410 POLGP54098 1239 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-212ENST00000466410 BACE1P56817 501 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 CAV1Q03135 178 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 STRN3Q13033 797 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 SCARA3Q6AZY7 606 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 TAX1BP1Q86VP1 789 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 PARP9Q8IXQ6 854 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 CYP4X1Q8N118 509 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 ANKRD42Q8N9B4 389 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 ZNF526Q8TF50 670 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-212ENST00000466410 NSRP1Q9H0G5 558 aaKnown RBP20.57■□□□□ 0.88
LIMS2-212ENST00000466410 KCNK9Q9NPC2 374 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 ZNF214Q9UL59 606 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-212ENST00000466410 STYXL1Q9Y6J8 313 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 TCP11X1B4DZS4 312 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 CETPP11597 493 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 XKR3Q5GH77 459 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 NBPF12Q5TAG4 269 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-212ENST00000466410 ZNF365Q70YC5 407 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 TRPM8Q7Z2W7 1104 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-212ENST00000466410 ASAP3Q8TDY4 903 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 VPS33BQ9H267 617 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 GINM1Q9NU53 330 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 FGFR1OP2Q9NVK5 253 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 RBAKQ9NYW8 714 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-212ENST00000466410 TBK1Q9UHD2 729 aa20.57■□□□□ 0.88
LIMS2-212ENST00000466410 NFASCO94856 1347 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 H0YCG3 227 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 ATP4AP20648 1035 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 SP2Q02086 613 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 PLEKHA7Q6IQ23 1121 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 KATNAL2Q8IYT4 538 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 ABCF3Q9NUQ8 709 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 KLHL11Q9NVR0 708 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 SLC12A4Q9UP95 1085 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 NUB1Q9Y5A7 615 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 CHUKO15111 745 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 GH1P01241 217 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 ATP13A4Q4VNC1 1196 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 IZUMO3Q5VZ72 239 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 RBBP8NLQ8NC74 664 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-212ENST00000466410 ZKSCAN4Q969J2 545 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-212ENST00000466410 C9orf72Q96LT7 481 aa20.56■□□□□ 0.88
LIMS2-212ENST00000466410 TARS2Q9BW92 718 aaKnown RBP20.56■□□□□ 0.88
LIMS2-212ENST00000466410 MRPL47Q9HD33 250 aaKnown RBP20.56■□□□□ 0.88
LIMS2-212ENST00000466410 ANKFY1Q9P2R3 1169 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms