RNA–Protein interactions for RNA: ENST00000466272.1

SMTN-214, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-214ENST00000466272 C11orf57Q6ZUT1 292 aaPredicted RBP11.87□□□□□ -0.51
SMTN-214ENST00000466272 WDR49Q8IV35 697 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 PARD3BQ8TEW8 1205 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 TMEM174Q8WUU8 243 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 ZNF516Q92618 1163 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 ELMO3Q96BJ8 720 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 FNBP1Q96RU3 617 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 GTPBP4Q9BZE4 634 aaKnown RBP11.87□□□□□ -0.51
SMTN-214ENST00000466272 NSUN3Q9H649 340 aaKnown RBP11.87□□□□□ -0.51
SMTN-214ENST00000466272 UNC80Q8N2C7 3258 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 PIRO00625 290 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 PER2O15055 1255 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 CETN3O15182 167 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 URODP06132 367 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 KRT19P08727 400 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 RPL17P18621 184 aaKnown RBP11.86□□□□□ -0.51
SMTN-214ENST00000466272 POU3F3P20264 500 aaPredicted RBP11.86□□□□□ -0.51
SMTN-214ENST00000466272 RPL9P32969 192 aaKnown RBP11.86□□□□□ -0.51
SMTN-214ENST00000466272 PPP1R2P41236 205 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 HYAL1Q12794 435 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 SMC1AQ14683 1233 aaKnown RBP11.86□□□□□ -0.51
SMTN-214ENST00000466272 KLHL40Q2TBA0 621 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 TDRD10Q5VZ19 366 aaKnown RBP11.86□□□□□ -0.51
SMTN-214ENST00000466272 DCLRE1AQ6PJP8 1040 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 RBM23Q86U06 439 aaKnown RBP11.86□□□□□ -0.51
SMTN-214ENST00000466272 MAFAQ8NHW3 353 aaPredicted RBP11.86□□□□□ -0.51
SMTN-214ENST00000466272 MICAL1Q8TDZ2 1067 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 DDX27Q96GQ7 796 aaKnown RBP11.86□□□□□ -0.51
SMTN-214ENST00000466272 ANKRD36BP1Q96IX9 119 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 MMRN2Q9H8L6 949 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 PRDM6Q9NQX0 595 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 PUF60Q9UHX1 559 aaKnown RBP11.86□□□□□ -0.51
SMTN-214ENST00000466272 AGAP1Q9UPQ3 857 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 STXBP5LQ9Y2K9 1186 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 FRMD4BQ9Y2L6 1034 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 NUB1Q9Y5A7 615 aa11.86□□□□□ -0.51
SMTN-214ENST00000466272 BRWD1Q9NSI6 2320 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 CARNS1A5YM72 827 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 C2orf71A6NGG8 1288 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 SLC16A3O15427 465 aaKnown RBP11.85□□□□□ -0.51
SMTN-214ENST00000466272 LINC01565O15544 149 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 TNNC2P02585 160 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 EPB41P11171 864 aaKnown RBP11.85□□□□□ -0.51
SMTN-214ENST00000466272 RPL13P26373 211 aaKnown RBP11.85□□□□□ -0.51
SMTN-214ENST00000466272 PSMC2P35998 433 aaKnown RBP11.85□□□□□ -0.51
SMTN-214ENST00000466272 NRIP1P48552 1158 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 AARSP49588 968 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMTN-214ENST00000466272 FKBP3Q00688 224 aaKnown RBP11.85□□□□□ -0.51
SMTN-214ENST00000466272 DSG1Q02413 1049 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 BFSP1Q12934 665 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 SURF1Q15526 300 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 NFKBIBQ15653 356 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 DCAF17Q5H9S7 520 aaPredicted RBP11.85□□□□□ -0.51
SMTN-214ENST00000466272 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.85□□□□□ -0.51
SMTN-214ENST00000466272 TRAPPC11Q7Z392 1133 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 CEP57Q86XR8 500 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 NT5DC4Q86YG4 428 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 GLYCTKQ8IVS8 523 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 CSGALNACT2Q8N6G5 542 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 MLKLQ8NB16 471 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 VN1R2Q8NFZ6 395 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 RIN2Q8WYP3 895 aaPredicted RBP11.85□□□□□ -0.51
SMTN-214ENST00000466272 BORCS6Q96GS4 357 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 SUSD3Q96L08 255 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 TSPAN18Q96SJ8 248 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 TTPALQ9BTX7 342 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 IGFLR1Q9H665 355 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 CHST7Q9NS84 486 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 LMCD1Q9NZU5 365 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 RWDD2AQ9UIY3 292 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 ITGA11Q9UKX5 1188 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 TIMM13Q9Y5L4 95 aaPredicted RBP11.85□□□□□ -0.51
SMTN-214ENST00000466272 C5orf42Q9H799 3197 aa11.85□□□□□ -0.51
SMTN-214ENST00000466272 BICDL2A1A5D9 508 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 MAPK13O15264 365 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 ADAM12O43184 909 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 LILRB3O75022 631 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 VNN1O95497 513 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 CXCL14O95715 111 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 GLP2RO95838 553 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 KRT13P13646 458 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 FGFR3P22607 806 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 GCLMP48507 274 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 TAF6P49848 677 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 VAMP7P51809 220 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 LILRA4P59901 499 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 TYRO3Q06418 890 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 PPP3CAQ08209 521 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 BIRC3Q13489 604 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 PSMD5Q16401 504 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 STX1AQ16623 288 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 DUOXA2Q1HG44 320 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 USP41Q3LFD5 358 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 CCDC40Q4G0X9 1142 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 KIAA0319Q5VV43 1072 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 LLGL2Q6P1M3 1020 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 RSPO2Q6UXX9 243 aaPredicted RBP11.84□□□□□ -0.51
SMTN-214ENST00000466272 INTS8Q75QN2 995 aaKnown RBP11.84□□□□□ -0.51
SMTN-214ENST00000466272 TMC2Q8TDI7 906 aa11.84□□□□□ -0.51
SMTN-214ENST00000466272 CACTINQ8WUQ7 758 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms