RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 SKIV2LQ15477 1246 aaKnown RBP17.2■□□□□ 0.34
AGRN-204ENST00000466223 LMBRD2Q68DH5 695 aaPredicted RBP17.2■□□□□ 0.34
AGRN-204ENST00000466223 PDXDC1Q6P996 788 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 DSTYKQ6XUX3 929 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 MRPL43Q8N983 215 aaKnown RBP17.2■□□□□ 0.34
AGRN-204ENST00000466223 MAFAQ8NHW3 353 aaPredicted RBP17.2■□□□□ 0.34
AGRN-204ENST00000466223 TMC2Q8TDI7 906 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 PARD3BQ8TEW8 1205 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 ZNF560Q96MR9 790 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 TTPALQ9BTX7 342 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 EMILIN2Q9BXX0 1053 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 MTMR12Q9C0I1 747 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 TLE6Q9H808 572 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 AGAP1Q9UPQ3 857 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 A0A0C4DFX4 3053 aa17.2■□□□□ 0.34
AGRN-204ENST00000466223 PRRC2BQ5JSZ5 2229 aaKnown RBP17.19■□□□□ 0.34
AGRN-204ENST00000466223 ANO9A1A5B4 782 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 FSD2A1L4K1 749 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 DLL1O00548 723 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 PIRO00625 290 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 C2CD2LO14523 706 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 SLC16A3O15427 465 aaKnown RBP17.19■□□□□ 0.34
AGRN-204ENST00000466223 NCK2O43639 380 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 PHACTR2O75167 634 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 ITGB3P05106 788 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 BRCC3P46736 316 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 TAF6P49848 677 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 VAMP7P51809 220 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 PMS1P54277 932 aaKnown RBP17.19■□□□□ 0.34
AGRN-204ENST00000466223 STX17P56962 302 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 CREMQ03060 361 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 TPD52L1Q16890 204 aaPredicted RBP17.19■□□□□ 0.34
AGRN-204ENST00000466223 KLHL40Q2TBA0 621 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 SV2CQ496J9 727 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 TCEAL5Q5H9L2 206 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 CT47A1Q5JQC4 288 aaPredicted RBP17.19■□□□□ 0.34
AGRN-204ENST00000466223 CAVIN1Q6NZI2 390 aaKnown RBP17.19■□□□□ 0.34
AGRN-204ENST00000466223 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.19■□□□□ 0.34
AGRN-204ENST00000466223 RBM43Q6ZSC3 357 aaKnown RBP17.19■□□□□ 0.34
AGRN-204ENST00000466223 TAS1R1Q7RTX1 841 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 C3orf58Q8NDZ4 430 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 APPL2Q8NEU8 664 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 RIN2Q8WYP3 895 aaPredicted RBP17.19■□□□□ 0.34
AGRN-204ENST00000466223 EEF2KMTQ96G04 330 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 CEP63Q96MT8 703 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 POP1Q99575 1024 aaKnown RBP17.19■□□□□ 0.34
AGRN-204ENST00000466223 VN1R3Q9BXE9 311 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.19■□□□□ 0.34
AGRN-204ENST00000466223 CHST7Q9NS84 486 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 RWDD2AQ9UIY3 292 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 IRAK3Q9Y616 596 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 TRANK1O15050 2925 aa17.19■□□□□ 0.34
AGRN-204ENST00000466223 C2orf71A6NGG8 1288 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 HIDE1A8MVS5 230 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 IKBKBO14920 756 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 STX10O60499 249 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 LETM1O95202 739 aaPredicted RBP17.18■□□□□ 0.34
AGRN-204ENST00000466223 POLR2BP30876 1174 aaKnown RBP17.18■□□□□ 0.34
AGRN-204ENST00000466223 LILRA4P59901 499 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 DSG1Q02413 1049 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 ENPEPQ07075 957 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 BFSP1Q12934 665 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 MYO1EQ12965 1108 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 BIRC3Q13489 604 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 TRPC3Q13507 836 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 KIAA0319Q5VV43 1072 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 TTI2Q6NXR4 508 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 TRAPPC11Q7Z392 1133 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 FILIP1Q7Z7B0 1213 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 RBM23Q86U06 439 aaKnown RBP17.18■□□□□ 0.34
AGRN-204ENST00000466223 GPR65Q8IYL9 337 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 RNF168Q8IYW5 571 aaPredicted RBP17.18■□□□□ 0.34
AGRN-204ENST00000466223 C1orf127Q8N9H9 656 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 OR5B17Q8NGF7 314 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 AUTS2Q8WXX7 1259 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 SUSD3Q96L08 255 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 CDCA3Q99618 268 aaPredicted RBP17.18■□□□□ 0.34
AGRN-204ENST00000466223 IGFLR1Q9H665 355 aa17.18■□□□□ 0.34
AGRN-204ENST00000466223 METTL14Q9HCE5 456 aaKnown RBP17.18■□□□□ 0.34
AGRN-204ENST00000466223 LRRIQ3A6PVS8 624 aaPredicted RBP17.17■□□□□ 0.34
AGRN-204ENST00000466223 I3L4J1 428 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 SYN3O14994 580 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 GNA14O95837 355 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 EFEMP2O95967 443 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 FGFR3P22607 806 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 NRIP1P48552 1158 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 PTPN14Q15678 1187 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 CCDC40Q4G0X9 1142 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 CD300LGQ6UXG3 332 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 ZC3H3Q8IXZ2 948 aaKnown RBP17.17■□□□□ 0.34
AGRN-204ENST00000466223 LRRC52Q8N7C0 313 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 B3GALT6Q96L58 329 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 ANO10Q9NW15 660 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 TMEM63CQ9P1W3 806 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 ARMCX3Q9UH62 379 aaPredicted RBP17.17■□□□□ 0.34
AGRN-204ENST00000466223 PCDHB8Q9UN66 801 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 PCDHGC5Q9Y5F6 944 aa17.17■□□□□ 0.34
AGRN-204ENST00000466223 MYO7AQ13402 2215 aa17.16■□□□□ 0.34
AGRN-204ENST00000466223 KPNA7A9QM74 516 aa17.16■□□□□ 0.34
AGRN-204ENST00000466223 H7C4K7 107 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms