RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 PTPRRQ15256 657 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 PREPLQ4J6C6 727 aaPredicted RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 DALRD3Q5D0E6 543 aaKnown RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 NOMO2Q5JPE7 1267 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 FCRLBQ6BAA4 426 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 SUMO4Q6EEV6 95 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 ZNF425Q6IV72 752 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 DDX46Q7L014 1031 aaKnown RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 Q8N9P0 234 aaPredicted RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 PDPRQ8NCN5 879 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 CLRN3Q8NCR9 226 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 TOR1AIP2Q8NFQ8 470 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 TSPEARQ8WU66 669 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 TMEM125Q96AQ2 219 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 MYOCQ99972 504 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 SCOCQ9UIL1 159 aa3.14□□□□□ -1.91
CCDC93-205ENST00000466171 RUVBL1Q9Y265 456 aaKnown RBP3.14□□□□□ -1.91
CCDC93-205ENST00000466171 PRAMEF33A0A0G2JMD5 474 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 A0A1W2PS29 197 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 KIAA0391O15091 583 aaKnown RBP3.13□□□□□ -1.91
CCDC93-205ENST00000466171 PROM1O43490 865 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 PRAMEF10O60809 474 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 HAUS5O94927 633 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 BMP15O95972 392 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 HOXB6P17509 224 aaKnown RBP3.13□□□□□ -1.91
CCDC93-205ENST00000466171 FPR1P21462 350 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 MCAMP43121 646 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 MAPK10P53779 464 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 ZNF844Q08AG5 666 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 LLGL1Q15334 1064 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.13□□□□□ -1.91
CCDC93-205ENST00000466171 CCHCR1Q8TD31 782 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 TGFBRAP1Q8WUH2 860 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 DDB2Q92466 427 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 TFAP2BQ92481 460 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 DRC1Q96MC2 740 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 HAPLN3Q96S86 360 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 FLRT1Q9NZU1 646 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 HSFX1Q9UBD0 423 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 SLC23A1Q9UHI7 598 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 ZNF804BA4D1E1 1349 aa3.13□□□□□ -1.91
CCDC93-205ENST00000466171 TCRBV7S2A1N4TA0A589 114 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 NEMP1O14524 444 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 FCER1AP12319 257 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 KCNA2P16389 499 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 DDCP20711 480 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 PPP3CAQ08209 521 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 MGAT2Q10469 447 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 TOR2AQ5JU69 321 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 AMIGO2Q86SJ2 522 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 B3GALNT2Q8NCR0 500 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 LMBR1Q8WVP7 490 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 HOXB13Q92826 284 aaPredicted RBP3.12□□□□□ -1.91
CCDC93-205ENST00000466171 C11orf54Q9H0W9 315 aaPredicted RBP3.12□□□□□ -1.91
CCDC93-205ENST00000466171 PIF1Q9H611 641 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 NRIP3Q9NQ35 241 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 DMRT3Q9NQL9 472 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 USP35Q9P2H5 1018 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 DNM3Q9UQ16 869 aa3.12□□□□□ -1.91
CCDC93-205ENST00000466171 A0A087X0B3 334 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 WIPF3A6NGB9 483 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 WNT10BO00744 389 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 BRINP1O60477 761 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 TTLL1O95922 423 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 CHRM2P08172 466 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 MTHFD1P11586 935 aaKnown RBP3.11□□□□□ -1.91
CCDC93-205ENST00000466171 ITPKBP27987 946 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 PCSK1P29120 753 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 SCAND1P57086 179 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 NXPH1P58417 271 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 ITIH3Q06033 890 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 SLFN5Q08AF3 891 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 STRN3Q13033 797 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 EIF2B5Q13144 721 aaKnown RBP3.11□□□□□ -1.91
CCDC93-205ENST00000466171 MTM1Q13496 603 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 MTX3Q5HYI7 312 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 DACT2Q5SW24 774 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 KCNK18Q7Z418 384 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 AOPEPQ8N6M6 819 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 VGLL2Q8N8G2 317 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 Q8NA96 180 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 SEMA6DQ8NFY4 1073 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 SLC30A5Q8TAD4 765 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 SNX19Q92543 992 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 DPF1Q92782 380 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 FCRL4Q96PJ5 515 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 ORAI2Q96SN7 254 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 C7orf25Q9BPX7 421 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 BRIP1Q9BX63 1249 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 SEMA4CQ9C0C4 833 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 DNAJC28Q9NX36 388 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 PADI4Q9UM07 663 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 PCDHGA2Q9Y5H1 932 aa3.11□□□□□ -1.91
CCDC93-205ENST00000466171 MYBBP1AQ9BQG0 1328 aaKnown RBP3.11□□□□□ -1.91
CCDC93-205ENST00000466171 LINC01548A6NM66 108 aa3.1□□□□□ -1.91
CCDC93-205ENST00000466171 TOR1BO14657 336 aa3.1□□□□□ -1.91
CCDC93-205ENST00000466171 URI1O94763 535 aaPredicted RBP3.1□□□□□ -1.91
CCDC93-205ENST00000466171 IGKV2-30P06310 120 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms