RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 C5orf42Q9H799 3197 aa28.09■■■□□ 2.09
SMC4-206ENST00000465903 PSMD5Q16401 504 aa28.08■■■□□ 2.09
SMC4-206ENST00000465903 CBWD2Q8IUF1 395 aa28.08■■■□□ 2.09
SMC4-206ENST00000465903 C12orf56Q8IXR9 622 aa28.08■■■□□ 2.09
SMC4-206ENST00000465903 NOC3LQ8WTT2 800 aaKnown RBP28.08■■■□□ 2.09
SMC4-206ENST00000465903 SUSD3Q96L08 255 aa28.08■■■□□ 2.09
SMC4-206ENST00000465903 KCTD10Q9H3F6 313 aa28.08■■■□□ 2.09
SMC4-206ENST00000465903 ANO9A1A5B4 782 aa28.07■■■□□ 2.08
SMC4-206ENST00000465903 PIRO00625 290 aa28.07■■■□□ 2.08
SMC4-206ENST00000465903 HOXB8P17481 243 aaPredicted RBP28.07■■■□□ 2.08
SMC4-206ENST00000465903 SMAD2Q15796 467 aaKnown RBP28.07■■■□□ 2.08
SMC4-206ENST00000465903 C9orf57Q5W0N0 161 aa28.07■■■□□ 2.08
SMC4-206ENST00000465903 LILRA6Q6PI73 481 aa28.07■■■□□ 2.08
SMC4-206ENST00000465903 RSPO2Q6UXX9 243 aaPredicted RBP28.07■■■□□ 2.08
SMC4-206ENST00000465903 NT5DC4Q86YG4 428 aa28.07■■■□□ 2.08
SMC4-206ENST00000465903 GLYCTKQ8IVS8 523 aa28.07■■■□□ 2.08
SMC4-206ENST00000465903 CCDC47Q96A33 483 aaKnown RBP28.07■■■□□ 2.08
SMC4-206ENST00000465903 NECAB3Q96P71 396 aaPredicted RBP28.07■■■□□ 2.08
SMC4-206ENST00000465903 APOL5Q9BWW9 433 aa28.07■■■□□ 2.08
SMC4-206ENST00000465903 PDE11AQ9HCR9 933 aa28.07■■■□□ 2.08
SMC4-206ENST00000465903 DPP3Q9NY33 737 aa28.07■■■□□ 2.08
SMC4-206ENST00000465903 CGNQ9P2M7 1197 aaKnown RBP28.07■■■□□ 2.08
SMC4-206ENST00000465903 C2orf16Q68DN1 1984 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 ZNF233A6NK53 670 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 SYN3O14994 580 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 ADAM12O43184 909 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 MCM4P33991 863 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 AARSP49588 968 aaKnown RBP eCLIP28.06■■■□□ 2.08
SMC4-206ENST00000465903 CREMQ03060 361 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 MRPL58Q14197 206 aaKnown RBP28.06■■■□□ 2.08
SMC4-206ENST00000465903 PDXDC1Q6P996 788 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 HS2ST1Q7LGA3 356 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 PALB2Q86YC2 1186 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 C12orf76Q8N812 135 aaPredicted RBP28.06■■■□□ 2.08
SMC4-206ENST00000465903 CCDC34Q96HJ3 373 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 MTRRQ9UBK8 725 aa28.06■■■□□ 2.08
SMC4-206ENST00000465903 M0QZQ0 153 aa28.05■■■□□ 2.08
SMC4-206ENST00000465903 C1RP00736 705 aa28.05■■■□□ 2.08
SMC4-206ENST00000465903 CYP2J2P51589 502 aa28.05■■■□□ 2.08
SMC4-206ENST00000465903 SCARA3Q6AZY7 606 aa28.05■■■□□ 2.08
SMC4-206ENST00000465903 XXYLT1Q8NBI6 393 aa28.05■■■□□ 2.08
SMC4-206ENST00000465903 FEZF2Q8TBJ5 459 aa28.05■■■□□ 2.08
SMC4-206ENST00000465903 SUSD6Q92537 303 aa28.05■■■□□ 2.08
SMC4-206ENST00000465903 FAM84AQ96KN4 292 aa28.05■■■□□ 2.08
SMC4-206ENST00000465903 KIAA1586Q9HCI6 787 aa28.05■■■□□ 2.08
SMC4-206ENST00000465903 USP15Q9Y4E8 981 aaPredicted RBP28.05■■■□□ 2.08
SMC4-206ENST00000465903 DOCK6Q96HP0 2047 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 TGM5O43548 720 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 TBC1D4O60343 1298 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 GLUD1P00367 558 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 VARS2Q5ST30 1063 aaKnown RBP28.04■■■□□ 2.08
SMC4-206ENST00000465903 ELOA2Q8IYF1 753 aaPredicted RBP28.04■■■□□ 2.08
SMC4-206ENST00000465903 RDH13Q8NBN7 331 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 SPATA20Q8TB22 786 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 ERCC4Q92889 916 aaPredicted RBP28.04■■■□□ 2.08
SMC4-206ENST00000465903 UHRF1Q96T88 793 aaPredicted RBP28.04■■■□□ 2.08
SMC4-206ENST00000465903 TSHZ2Q9NRE2 1034 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 DZANK1Q9NVP4 752 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 DMAC2Q9NW81 257 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 PCDHB8Q9UN66 801 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 BACE2Q9Y5Z0 518 aa28.04■■■□□ 2.08
SMC4-206ENST00000465903 PDXKO00764 312 aa28.03■■■□□ 2.08
SMC4-206ENST00000465903 SPTLC1O15269 473 aa28.03■■■□□ 2.08
SMC4-206ENST00000465903 SPATA31D3P0C874 917 aa28.03■■■□□ 2.08
SMC4-206ENST00000465903 LILRA4P59901 499 aa28.03■■■□□ 2.08
SMC4-206ENST00000465903 SNRNP35Q16560 246 aaKnown RBP28.03■■■□□ 2.08
SMC4-206ENST00000465903 SPATA31D4Q6ZUB0 917 aa28.03■■■□□ 2.08
SMC4-206ENST00000465903 ANKS3Q6ZW76 656 aa28.03■■■□□ 2.08
SMC4-206ENST00000465903 CDH22Q9UJ99 828 aa28.03■■■□□ 2.08
SMC4-206ENST00000465903 MAPK8IP1Q9UQF2 711 aa28.03■■■□□ 2.08
SMC4-206ENST00000465903 FAM50BQ9Y247 325 aa28.03■■■□□ 2.08
SMC4-206ENST00000465903 PCDHA5Q9Y5H7 936 aa28.03■■■□□ 2.08
SMC4-206ENST00000465903 CUL9Q8IWT3 2517 aa28.02■■■□□ 2.08
SMC4-206ENST00000465903 DLL1O00548 723 aa28.02■■■□□ 2.08
SMC4-206ENST00000465903 TFAMQ00059 246 aaKnown RBP28.02■■■□□ 2.08
SMC4-206ENST00000465903 RARS2Q5T160 578 aaKnown RBP28.02■■■□□ 2.08
SMC4-206ENST00000465903 C1orf127Q8N9H9 656 aa28.02■■■□□ 2.08
SMC4-206ENST00000465903 CXorf38Q8TB03 319 aa28.02■■■□□ 2.08
SMC4-206ENST00000465903 GOLGA5Q8TBA6 731 aa28.02■■■□□ 2.08
SMC4-206ENST00000465903 TMEM174Q8WUU8 243 aa28.02■■■□□ 2.08
SMC4-206ENST00000465903 BORCS6Q96GS4 357 aa28.02■■■□□ 2.08
SMC4-206ENST00000465903 IPO9Q96P70 1041 aaKnown RBP28.02■■■□□ 2.08
SMC4-206ENST00000465903 ADAM7Q9H2U9 754 aa28.02■■■□□ 2.08
SMC4-206ENST00000465903 MAN1C1Q9NR34 630 aa28.02■■■□□ 2.08
SMC4-206ENST00000465903 TSC2P49815 1807 aa28.02■■■□□ 2.08
SMC4-206ENST00000465903 PTPRJQ12913 1337 aa28.01■■■□□ 2.07
SMC4-206ENST00000465903 TULP1O00294 542 aaPredicted RBP28.01■■■□□ 2.07
SMC4-206ENST00000465903 OR1D2P34982 312 aa28.01■■■□□ 2.07
SMC4-206ENST00000465903 RAB33AQ14088 237 aa28.01■■■□□ 2.07
SMC4-206ENST00000465903 SURF1Q15526 300 aa28.01■■■□□ 2.07
SMC4-206ENST00000465903 LMBRD2Q68DH5 695 aaPredicted RBP28.01■■■□□ 2.07
SMC4-206ENST00000465903 SLC9A9Q8IVB4 645 aa28.01■■■□□ 2.07
SMC4-206ENST00000465903 GUF1Q8N442 669 aaKnown RBP28.01■■■□□ 2.07
SMC4-206ENST00000465903 CACTINQ8WUQ7 758 aaKnown RBP28.01■■■□□ 2.07
SMC4-206ENST00000465903 GSDMAQ96QA5 445 aa28.01■■■□□ 2.07
SMC4-206ENST00000465903 INTS13Q9NVM9 706 aa28.01■■■□□ 2.07
SMC4-206ENST00000465903 CDY1Q9Y6F8 540 aa28.01■■■□□ 2.07
SMC4-206ENST00000465903 ITIH3Q06033 890 aa28■■■□□ 2.07
SMC4-206ENST00000465903 CYP24A1Q07973 514 aa28■■■□□ 2.07
SMC4-206ENST00000465903 DSTYKQ6XUX3 929 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms