RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 MTMR8Q96EF0 704 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 DDX11Q96FC9 970 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 UBAC1Q9BSL1 405 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 BCAS3Q9H6U6 928 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 PDGFCQ9NRA1 345 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 DDX20Q9UHI6 824 aaKnown RBP5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 CTDP1Q9Y5B0 961 aaPredicted RBP5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 SNX14Q9Y5W7 946 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 BACE2Q9Y5Z0 518 aa5.57□□□□□ -1.52
EXOSC3-204ENST00000465860 A0A1B0GTL3 188 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 hCG_1642624A0A1W2PR95 340 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 PTPDC1A2A3K4 754 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 H0YGN5 161 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 SEPT4O43236 478 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 PGK1P00558 417 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 ASGR2P07307 311 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 NCAM1P13591 858 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 SLURP1P55000 103 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 TRDNQ13061 729 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 GRB10Q13322 594 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 WTAPQ15007 396 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 LRRC41Q15345 812 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 SKOR2Q2VWA4 1001 aaPredicted RBP5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 CCDC144BQ3MJ40 725 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 ASPRV1Q53RT3 343 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 KIAA1211LQ6NV74 962 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 TAPT1Q6NXT6 567 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 EEPD1Q7L9B9 569 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 RALYLQ86SE5 291 aaKnown RBP5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 FBXO16Q8IX29 292 aaPredicted RBP5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 ADGRG2Q8IZP9 1017 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 LZTR1Q8N653 840 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 FAM169BQ8N8A8 192 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 PIBF1Q8WXW3 757 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 ALG3Q92685 438 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 FERMT2Q96AC1 680 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 MRRFQ96E11 262 aaKnown RBP5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 TSPAN17Q96FV3 270 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 RCC1LQ96I51 464 aaKnown RBP5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 TAAR1Q96RJ0 339 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 PIGSQ96S52 555 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 MTA3Q9BTC8 594 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 RNF38Q9H0F5 515 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 RIOX1Q9H6W3 641 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 GULP1Q9UBP9 304 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 FBXO40Q9UH90 709 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 PMF1-BGLAPU3KQ54 211 aa5.56□□□□□ -1.52
EXOSC3-204ENST00000465860 WDR19Q8NEZ3 1342 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 SYNRGQ9UMZ2 1314 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 ADAMTS3O15072 1205 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 DTNBO60941 627 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 CALML3P27482 149 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 PMLP29590 882 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 HOXA13P31271 388 aaPredicted RBP5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 MCM5P33992 734 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 HSPA4P34932 840 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 COPB2P35606 906 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 ADCYAP1R1P41586 468 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 ALDH5A1P51649 535 aaPredicted RBP5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 RPS6P62753 249 aaKnown RBP5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 BEX3Q00994 111 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 ACVR2BQ13705 512 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 TKFCQ3LXA3 575 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 CCDC178Q5BJE1 867 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 CCSAPQ6IQ19 270 aaPredicted RBP5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 CABP7Q86V35 215 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 HOMER1Q86YM7 354 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 SRBD1Q8N5C6 995 aaKnown RBP5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 MORC4Q8TE76 937 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 NUP133Q8WUM0 1156 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 DPF3Q92784 378 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 COPS5Q92905 334 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 NEK1Q96PY6 1258 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 SENP6Q9GZR1 1112 aaPredicted RBP5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 C11orf49Q9H6J7 331 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 APEX2Q9UBZ4 518 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 ZHX1Q9UKY1 873 aaPredicted RBP5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 FAN1Q9Y2M0 1017 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 CDH23Q9H251 3354 aa5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 TRIP12Q14669 1992 aaPredicted RBP5.55□□□□□ -1.52
EXOSC3-204ENST00000465860 NPHP3-ACAD11A0A0J9YXS1 232 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 ZBTB5O15062 677 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 DHX16O60231 1041 aaKnown RBP5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 ARIH2O95376 493 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 PAMP19021 973 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 EDNRBP24530 442 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 ITGB8P26012 769 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 LIFRP42702 1097 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 KCNC1P48547 511 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 NT5C2P49902 561 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 DLX2Q07687 328 aaPredicted RBP5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 ERICH6BQ5W0A0 696 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 APOA5Q6Q788 366 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 VHLLQ6RSH7 139 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 CASC1Q6TDU7 716 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 LIPIQ6XZB0 460 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 RNF207Q6ZRF8 634 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 NECAB2Q7Z6G3 386 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 FRMD5Q7Z6J6 570 aa5.54□□□□□ -1.52
EXOSC3-204ENST00000465860 MSL3Q8N5Y2 521 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms