RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 CTXN3Q4LDR2 81 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 XKR4Q5GH76 650 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 HEATR6Q6AI08 1181 aaKnown RBP11.31□□□□□ -0.6
GPNMB-206ENST00000465673 TAS1R3Q7RTX0 852 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 TTC8Q8TAM2 541 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 ZSCAN18Q8TBC5 510 aaPredicted RBP11.31□□□□□ -0.6
GPNMB-206ENST00000465673 SMARCD2Q92925 531 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 BORCS6Q96GS4 357 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 ZBTB45Q96K62 511 aaPredicted RBP11.31□□□□□ -0.6
GPNMB-206ENST00000465673 IFT74Q96LB3 600 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 UROC1Q96N76 676 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 ACO2Q99798 780 aaKnown RBP11.31□□□□□ -0.6
GPNMB-206ENST00000465673 RTKNQ9BST9 563 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 PTPRHQ9HD43 1115 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 TNFSF13BQ9Y275 285 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 TICRRQ7Z2Z1 1910 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 COL4A2P08572 1712 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 HEPACAM2A8MVW5 462 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 MAN2B1O00754 1011 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 ZNF197O14709 1029 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 VNN2O95498 520 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 OR4Q2P0C623 313 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 OR52Z1P0C646 297 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 PSMC3P17980 439 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 CCT6AP40227 531 aaKnown RBP11.3□□□□□ -0.6
GPNMB-206ENST00000465673 NPTX2P47972 431 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 CDR1P51861 262 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 EFNA5P52803 228 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 YARSP54577 528 aaKnown RBP11.3□□□□□ -0.6
GPNMB-206ENST00000465673 SPAG1Q07617 926 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 TRIM29Q14134 588 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 NBR1Q14596 966 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 PPM1JQ5JR12 505 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 STXBP5Q5T5C0 1151 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 CYP4A22Q5TCH4 519 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 RNF19BQ6ZMZ0 732 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 Q6ZS52 159 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 DAW1Q8N136 415 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 SHKBP1Q8TBC3 707 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 IRF7Q92985 503 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 PGLYRP2Q96PD5 576 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 CCDC94Q9BW85 323 aaPredicted RBP11.3□□□□□ -0.6
GPNMB-206ENST00000465673 FAM126AQ9BYI3 521 aaPredicted RBP11.3□□□□□ -0.6
GPNMB-206ENST00000465673 CRISPLD1Q9H336 500 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 RAB23Q9ULC3 237 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 KIAA1024Q9UPX6 916 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 NUB1Q9Y5A7 615 aa11.3□□□□□ -0.6
GPNMB-206ENST00000465673 TIMM13Q9Y5L4 95 aaPredicted RBP11.3□□□□□ -0.6
GPNMB-206ENST00000465673 SLC38A8A6NNN8 435 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 SFI1A8K8P3 1242 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 ARNTLO00327 626 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 ABLIM1O14639 778 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 ZNF263O14978 683 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 SYN3O14994 580 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 ADRB1P08588 477 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 KCNA4P22459 653 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 MCM4P33991 863 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 CXCL12P48061 93 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 CCR3P51677 355 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 SIM2Q14190 667 aaPredicted RBP11.29□□□□□ -0.6
GPNMB-206ENST00000465673 LAIR1Q6GTX8 287 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 IQCEQ6IPM2 695 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 TXNDC11Q6PKC3 985 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 MAMSTRQ6ZN01 415 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 CELF5Q8N6W0 485 aaKnown RBP11.29□□□□□ -0.6
GPNMB-206ENST00000465673 ERMNQ8TAM6 284 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 DDX12PQ92771 950 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 KIFAP3Q92845 792 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 ZFYVE19Q96K21 471 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 ZNF512Q96ME7 567 aaPredicted RBP11.29□□□□□ -0.6
GPNMB-206ENST00000465673 TBC1D32Q96NH3 1257 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 ACAP3Q96P50 834 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 LRRC3BQ96PB8 259 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 TCHPQ9BT92 498 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 TOPORSQ9NS56 1045 aaPredicted RBP11.29□□□□□ -0.6
GPNMB-206ENST00000465673 SEMA4GQ9NTN9 838 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 TUBGCP4Q9UGJ1 667 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 SDK1Q7Z5N4 2213 aa11.29□□□□□ -0.6
GPNMB-206ENST00000465673 A0A1W2PRU2 124 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 PP2D1A8MPX8 630 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 E9PMD0 336 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 H7C4K7 107 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 SLC30A4O14863 429 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 HIP1RO75146 1068 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 MICAL2O94851 1124 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 RETP07949 1114 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 CPB1P15086 417 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 KCNE1P15382 129 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 CDC25AP30304 524 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 NRLP54845 237 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 ANKRD1Q15327 319 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 CCDC6Q16204 474 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 ST3GAL2Q16842 350 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 SLC10A6Q3KNW5 377 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 TPGS2Q68CL5 300 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 MFSD6LQ8IWD5 586 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 ELMOD1Q8N336 334 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 C4orf32Q8N8J7 132 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 SUSD3Q96L08 255 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 RUSC1Q9BVN2 902 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms