RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 COG5Q9UP83 839 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 TSC2P49815 1807 aa21.99■■□□□ 1.11
SKA3-205ENST00000465471 M0QZQ0 153 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 PER2O15055 1255 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 MAPK13O15264 365 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 CLASP2O75122 1294 aaKnown RBP21.98■■□□□ 1.11
SKA3-205ENST00000465471 CNPP09543 421 aaKnown RBP21.98■■□□□ 1.11
SKA3-205ENST00000465471 NR2F2P24468 414 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 LTBRP36941 435 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 PPP1R2P41236 205 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 CASP4P49662 377 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 TFAMQ00059 246 aaKnown RBP21.98■■□□□ 1.11
SKA3-205ENST00000465471 ISM2Q6H9L7 571 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 ZC3H3Q8IXZ2 948 aaKnown RBP21.98■■□□□ 1.11
SKA3-205ENST00000465471 CACTINQ8WUQ7 758 aaKnown RBP21.98■■□□□ 1.11
SKA3-205ENST00000465471 FAM84AQ96KN4 292 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 KLHL5Q96PQ7 755 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 CGRRF1Q99675 332 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 MTMR12Q9C0I1 747 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 NUP62CLQ9H1M0 184 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 UBE2ZQ9H832 354 aaPredicted RBP21.98■■□□□ 1.11
SKA3-205ENST00000465471 FNIP2Q9P278 1114 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 UNC80Q8N2C7 3258 aa21.98■■□□□ 1.11
SKA3-205ENST00000465471 PPP1R3GB7ZBB8 358 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 I3L4J1 428 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 BIN1O00499 593 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 SYN3O14994 580 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 LINC01565O15544 149 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 PAX3P23760 479 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 TKTP29401 623 aaKnown RBP21.97■■□□□ 1.11
SKA3-205ENST00000465471 PMS1P54277 932 aaKnown RBP21.97■■□□□ 1.11
SKA3-205ENST00000465471 LILRA4P59901 499 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 MCCD1P59942 119 aaPredicted RBP21.97■■□□□ 1.11
SKA3-205ENST00000465471 CLDN10P78369 228 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 SKIV2LQ15477 1246 aaKnown RBP21.97■■□□□ 1.11
SKA3-205ENST00000465471 KIAA1841Q6NSI8 718 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 TMEM184AQ6ZMB5 413 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 OR5B17Q8NGF7 314 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 LNX1Q8TBB1 728 aaPredicted RBP21.97■■□□□ 1.11
SKA3-205ENST00000465471 RIN2Q8WYP3 895 aaPredicted RBP21.97■■□□□ 1.11
SKA3-205ENST00000465471 HLA-CQ95604 372 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 DHTKD1Q96HY7 919 aaPredicted RBP21.97■■□□□ 1.11
SKA3-205ENST00000465471 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.97■■□□□ 1.11
SKA3-205ENST00000465471 SIX4Q9UIU6 781 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 ITGA11Q9UKX5 1188 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 NUB1Q9Y5A7 615 aa21.97■■□□□ 1.11
SKA3-205ENST00000465471 PLXNA3P51805 1871 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 C2CD2LO14523 706 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 PSMA7O14818 248 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 SPTLC1O15269 473 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 TEX28O15482 410 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 TBX10O75333 385 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 AKAP3O75969 853 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 CCNE1P24864 410 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 RPL13P26373 211 aaKnown RBP21.96■■□□□ 1.11
SKA3-205ENST00000465471 MCM4P33991 863 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 CREMQ03060 361 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 LRRC63Q05C16 580 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 LMBRD2Q68DH5 695 aaPredicted RBP21.96■■□□□ 1.11
SKA3-205ENST00000465471 FOXR2Q6PJQ5 311 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 PIAS4Q8N2W9 510 aaPredicted RBP21.96■■□□□ 1.11
SKA3-205ENST00000465471 PARD3BQ8TEW8 1205 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 SLC22A17Q8WUG5 538 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 EMILIN2Q9BXX0 1053 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 IGFLR1Q9H665 355 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 CLDND1Q9NY35 253 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 THEGQ9P2T0 379 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 PCDHB8Q9UN66 801 aa21.96■■□□□ 1.11
SKA3-205ENST00000465471 C1RP00736 705 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 ITGB3P05106 788 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 TMEM191BP0C7N4 346 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 CA8P35219 290 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 RBM10P98175 930 aaKnown RBP21.95■■□□□ 1.1
SKA3-205ENST00000465471 ADAM9Q13443 819 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 STIM1Q13586 685 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 MRPL58Q14197 206 aaKnown RBP21.95■■□□□ 1.1
SKA3-205ENST00000465471 DUOXA2Q1HG44 320 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 ANKRD40Q6AI12 368 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 SCARA3Q6AZY7 606 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 PDXDC1Q6P996 788 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 PRSS55Q6UWB4 352 aaPredicted RBP21.95■■□□□ 1.1
SKA3-205ENST00000465471 CCDC127Q96BQ5 260 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 BORCS6Q96GS4 357 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 ANKRD36BP1Q96IX9 119 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 FNBP1Q96RU3 617 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 CLEC1BQ9P126 229 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 MTRRQ9UBK8 725 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 FRMD4BQ9Y2L6 1034 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 HCFC2Q9Y5Z7 792 aa21.95■■□□□ 1.1
SKA3-205ENST00000465471 TRIM49BA6NDI0 452 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 MBD3O95983 291 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 DLATP10515 647 aaKnown RBP21.94■■□□□ 1.1
SKA3-205ENST00000465471 POLR2BP30876 1174 aaKnown RBP21.94■■□□□ 1.1
SKA3-205ENST00000465471 CLCN4P51793 760 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 ENPEPQ07075 957 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 DLX2Q07687 328 aaPredicted RBP21.94■■□□□ 1.1
SKA3-205ENST00000465471 PSMD5Q16401 504 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 CEP135Q66GS9 1140 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 RBM43Q6ZSC3 357 aaKnown RBP21.94■■□□□ 1.1
SKA3-205ENST00000465471 PPFIBP1Q86W92 1011 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms