RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SERPINB12Q96P63 405 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 AAASQ9NRG9 546 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 ANAPC5Q9UJX4 755 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 STYXL1Q9Y6J8 313 aa19.5■□□□□ 0.71
SYNE4-204ENST00000465425 ARID2Q68CP9 1835 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 ASAP2O43150 1006 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 THAP12O43422 761 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 IFNAR2P48551 515 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 VPS41P49754 854 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 MNAT1P51948 309 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 WNT7BP56706 349 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 PTP4A2Q12974 167 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 RHBDF2Q6PJF5 856 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 ZNF365Q70YC5 407 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.49■□□□□ 0.71
SYNE4-204ENST00000465425 HERPUD2Q9BSE4 406 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 MSTO1Q9BUK6 570 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 NSRP1Q9H0G5 558 aaKnown RBP19.49■□□□□ 0.71
SYNE4-204ENST00000465425 ZNF302Q9NR11 478 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 SCINQ9Y6U3 715 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 KIAA1217Q5T5P2 1943 aa19.49■□□□□ 0.71
SYNE4-204ENST00000465425 VNN1O95497 513 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 TTC4O95801 387 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 TBXAS1P24557 533 aaPredicted RBP19.48■□□□□ 0.71
SYNE4-204ENST00000465425 GJC1P36383 396 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 NAMPTP43490 491 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 ZNF568Q3ZCX4 644 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 ABRAQ8N0Z2 381 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 IPO4Q8TEX9 1081 aaKnown RBP19.48■□□□□ 0.71
SYNE4-204ENST00000465425 ARHGEF2Q92974 986 aaKnown RBP19.48■□□□□ 0.71
SYNE4-204ENST00000465425 VCPIP1Q96JH7 1222 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 PORCNQ9H237 461 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 CCDC134Q9H6E4 229 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 DNAJC17Q9NVM6 304 aaKnown RBP19.48■□□□□ 0.71
SYNE4-204ENST00000465425 R3HDM2Q9Y2K5 976 aaKnown RBP19.48■□□□□ 0.71
SYNE4-204ENST00000465425 PTPRJQ12913 1337 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 ATP2C2O75185 946 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 OATP04181 439 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 ACO1P21399 889 aaKnown RBP19.48■□□□□ 0.71
SYNE4-204ENST00000465425 IVDP26440 423 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 NOMO3P69849 1222 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 MAMLD1Q13495 774 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 EXOC3L1Q86VI1 746 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 LRRC34Q8IZ02 419 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 CCDC89Q8N998 374 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 ZBTB45Q96K62 511 aaPredicted RBP19.48■□□□□ 0.71
SYNE4-204ENST00000465425 USTQ9Y2C2 406 aa19.48■□□□□ 0.71
SYNE4-204ENST00000465425 DNM1LO00429 736 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 TLR3O15455 904 aaKnown RBP19.47■□□□□ 0.71
SYNE4-204ENST00000465425 SSTR3P32745 418 aaPredicted RBP19.47■□□□□ 0.71
SYNE4-204ENST00000465425 CETN2P41208 172 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 NOP14P78316 857 aaKnown RBP19.47■□□□□ 0.71
SYNE4-204ENST00000465425 CNGA2Q16280 664 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 PPP1R2P3Q6NXS1 205 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 CRELD2Q6UXH1 353 aaPredicted RBP19.47■□□□□ 0.71
SYNE4-204ENST00000465425 RBBP8NLQ8NC74 664 aaPredicted RBP19.47■□□□□ 0.71
SYNE4-204ENST00000465425 ASAP3Q8TDY4 903 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 OSBPL8Q9BZF1 889 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 IMPG2Q9BZV3 1241 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 KDM4CQ9H3R0 1056 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 APOBEC3GQ9HC16 384 aaKnown RBP19.47■□□□□ 0.71
SYNE4-204ENST00000465425 ADAMTS5Q9UNA0 930 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 WDR81Q562E7 1941 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 UMODL1Q5DID0 1318 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 CFHP08603 1231 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 GLRA2P23416 452 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 KLF1Q13351 362 aaPredicted RBP19.47■□□□□ 0.71
SYNE4-204ENST00000465425 CCNG2Q16589 344 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 KYNUQ16719 465 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 ZFYVE27Q5T4F4 411 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 BBOF1Q8ND07 529 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 CCT6BQ92526 530 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 TARS2Q9BW92 718 aaKnown RBP19.47■□□□□ 0.71
SYNE4-204ENST00000465425 HAPLN2Q9GZV7 340 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 FBXO40Q9UH90 709 aa19.47■□□□□ 0.71
SYNE4-204ENST00000465425 C19orf81C9J6K1 198 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 O00370 1275 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 CLTAP09496 248 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 GTF2A1P52655 376 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-204ENST00000465425 SP2Q02086 613 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 STXBP2Q15833 593 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 SPRED3Q2MJR0 410 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 LACTB2Q53H82 288 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-204ENST00000465425 GSTA5Q7RTV2 222 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 TAX1BP1Q86VP1 789 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 KATNAL2Q8IYT4 538 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 C12orf42Q96LP6 360 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 CGRRF1Q99675 332 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 JPH2Q9BR39 696 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-204ENST00000465425 DHX33Q9H6R0 707 aaKnown RBP19.46■□□□□ 0.71
SYNE4-204ENST00000465425 MAFBQ9Y5Q3 323 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-204ENST00000465425 ATP2A1O14983 1001 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 PIGRP01833 764 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 HARSP12081 509 aaKnown RBP19.46■□□□□ 0.71
SYNE4-204ENST00000465425 CD58P19256 250 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 SCTRP47872 440 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 GMPSP49915 693 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-204ENST00000465425 TAS2R40P59535 323 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 ITIH4Q14624 930 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 DALRD3Q5D0E6 543 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms