RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 ZNF560Q96MR9 790 aa19.99■□□□□ 0.79
SCAMP3-204ENST00000465312 HERC2P3Q9BVR0 1158 aa19.99■□□□□ 0.79
SCAMP3-204ENST00000465312 ITGA11Q9UKX5 1188 aa19.99■□□□□ 0.79
SCAMP3-204ENST00000465312 AGAP1Q9UPQ3 857 aa19.99■□□□□ 0.79
SCAMP3-204ENST00000465312 PTPRJQ12913 1337 aa19.99■□□□□ 0.79
SCAMP3-204ENST00000465312 LRRIQ3A6PVS8 624 aaPredicted RBP19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 PPEF2O14830 753 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 SLC16A3O15427 465 aaKnown RBP19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 LETM1O95202 739 aaPredicted RBP19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 CXCL14O95715 111 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 SOD2P04179 222 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 TRIM49P0CI25 452 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 TRIM49CP0CI26 452 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 IRS1P35568 1242 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 GLUD2P49448 558 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 ERVFC1P60507 584 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 BFSP1Q12934 665 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 TRPC3Q13507 836 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 SKIV2LQ15477 1246 aaKnown RBP19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 USP41Q3LFD5 358 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 PARD3BQ8TEW8 1205 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 TMEM174Q8WUU8 243 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 B3GALT6Q96L58 329 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 CEP63Q96MT8 703 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 MKNK1Q9BUB5 465 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 SRRTQ9BXP5 876 aaKnown RBP19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 GPR62Q9BZJ7 368 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 MRPL17Q9NRX2 175 aaKnown RBP19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 PCDHGC5Q9Y5F6 944 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 MTCH2Q9Y6C9 303 aa19.98■□□□□ 0.79
SCAMP3-204ENST00000465312 CHD7Q9P2D1 2997 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 TMEM189-UBE2V1I3L0A0 370 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 MAPK13O15264 365 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 TAF6P49848 677 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 DLG4P78352 724 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 RBP5P82980 135 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 SV2CQ496J9 727 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 EP400NLQ6ZTU2 488 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 RBM23Q86U06 439 aaKnown RBP19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 C1orf127Q8N9H9 656 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 TMC2Q8TDI7 906 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 DUSP9Q99956 384 aaKnown RBP19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 ZBP1Q9H171 429 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 NSUN3Q9H649 340 aaKnown RBP19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 NGRNQ9NPE2 291 aaKnown RBP19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 LMCD1Q9NZU5 365 aa19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 ARMCX3Q9UH62 379 aaPredicted RBP19.97■□□□□ 0.79
SCAMP3-204ENST00000465312 SYCE3A1L190 88 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 CTSAP10619 480 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 IGFBP6P24592 240 aaPredicted RBP19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 AP3M2P53677 418 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 TYRO3Q06418 890 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 MYO1EQ12965 1108 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 PDE12Q6L8Q7 609 aaKnown RBP19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 TAS1R1Q7RTX1 841 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 TRAPPC11Q7Z392 1133 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 PLEKHO2Q8TD55 490 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 RIN2Q8WYP3 895 aaPredicted RBP19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 TTPALQ9BTX7 342 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 VN1R3Q9BXE9 311 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 IGFLR1Q9H665 355 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 SSX2IPQ9Y2D8 614 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 SZT2Q5T011 3432 aa19.96■□□□□ 0.79
SCAMP3-204ENST00000465312 STX10O60499 249 aa19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 CCDC192P0DO97 292 aa19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 PNPLA4P41247 253 aa19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 PIK3CAP42336 1068 aa19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 FILIP1Q7Z7B0 1213 aa19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 GLYCTKQ8IVS8 523 aa19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 DNAJC25Q9H1X3 360 aa19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 TLE6Q9H808 572 aa19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 METTL14Q9HCE5 456 aaKnown RBP19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 MAGEC2Q9UBF1 373 aaPredicted RBP19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 CDH23Q9H251 3354 aa19.95■□□□□ 0.78
SCAMP3-204ENST00000465312 ANO9A1A5B4 782 aa19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 PIRO00625 290 aa19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 GNA14O95837 355 aa19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 ODC1P11926 461 aa19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 ERCC5P28715 1186 aaPredicted RBP19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 TKTP29401 623 aaKnown RBP19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 GCLMP48507 274 aa19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 CAMK1Q14012 370 aa19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 TCEAL5Q5H9L2 206 aa19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 ZC3H3Q8IXZ2 948 aaKnown RBP19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 EMILIN2Q9BXX0 1053 aa19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 NAT10Q9H0A0 1025 aaKnown RBP19.94■□□□□ 0.78
SCAMP3-204ENST00000465312 ARHGEF37A1IGU5 675 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 SPDYE4A6NLX3 237 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 HIDE1A8MVS5 230 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 FSCN2O14926 492 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 PER2O15055 1255 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 NRIP1P48552 1158 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 LILRA4P59901 499 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 PTPN14Q15678 1187 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 PSMD5Q16401 504 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 HSP90AA4PQ58FG1 418 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 RTP2Q5QGT7 225 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 FOXR2Q6PJQ5 311 aa19.93■□□□□ 0.78
SCAMP3-204ENST00000465312 PRSS55Q6UWB4 352 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms