RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CYP26C1Q6V0L0 522 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 ABI1Q8IZP0 508 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 OR8K1Q8NGG5 319 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 GDF15Q99988 308 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 TMEM8AQ9HCN3 771 aa18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 LUC7L2Q9Y383 392 aaKnown RBP18.24■□□□□ 0.51
EXOSC3-203ENST00000465229 CCDC175P0C221 793 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 TMEM191BP0C7N4 346 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 GUCY2FP51841 1108 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 SOX4Q06945 474 aaPredicted RBP18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 TDRD10Q5VZ19 366 aaKnown RBP18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 KRT39Q6A163 491 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 TOGARAM2Q6ZUX3 1019 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 TRAPPC11Q7Z392 1133 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 C1orf127Q8N9H9 656 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 ANKRD36BP1Q96IX9 119 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 DPP3Q9NY33 737 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 KANSL3Q9P2N6 904 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 TUBGCP4Q9UGJ1 667 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 UBQLN1Q9UMX0 589 aaKnown RBP18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 SLC4A7Q9Y6M7 1214 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 ANK1P16157 1881 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 TBKBP1A7MCY6 615 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 PMM2O15305 246 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 CTIFO43310 598 aaKnown RBP18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 TNNC2P02585 160 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 CYP3A5P20815 502 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 MXI1P50539 228 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 GRIK3Q13003 919 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 SYCP1Q15431 976 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 SHHQ15465 462 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 TRIM65Q6PJ69 517 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 CXorf38Q8TB03 319 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 URGCPQ8TCY9 931 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 ZNF689Q96CS4 500 aaPredicted RBP18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 SLC38A7Q9NVC3 462 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 TBC1D13Q9NVG8 400 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 ADGRG1Q9Y653 693 aa18.23■□□□□ 0.51
EXOSC3-203ENST00000465229 SOWAHDA6NJG2 315 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 RNF225M0QZC1 329 aaPredicted RBP18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 GJB5O95377 273 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 VNN1O95497 513 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 CST3P01034 146 aaPredicted RBP18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 BIRC3Q13489 604 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 TSR1Q2NL82 804 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 RAD9BQ6WBX8 426 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 ZNF280BQ86YH2 543 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 BEST2Q8NFU1 509 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 PHOSPHO2Q8TCD6 241 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 TAS1R2Q8TE23 839 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 MTIF3Q9H2K0 278 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 GOLGA2P5Q9HBQ8 144 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 SIX4Q9UIU6 781 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 COQ4Q9Y3A0 265 aa18.22■□□□□ 0.51
EXOSC3-203ENST00000465229 P4HA2O15460 535 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 XPOTO43592 962 aaKnown RBP18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 N4BP1O75113 896 aaKnown RBP18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 DDHD2O94830 711 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 ZBED6P86452 979 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 MYL7Q01449 175 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 MEA1Q16626 185 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 RSPH1Q8WYR4 309 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 ZNF592Q92610 1267 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 SLC9A7Q96T83 725 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 CRACR2AQ9BSW2 395 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 EDEM3Q9BZQ6 932 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 UBE2OQ9C0C9 1292 aaKnown RBP18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 RC3H2Q9HBD1 1191 aaKnown RBP18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 SIK3Q9Y2K2 1263 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 LAMA3Q16787 3333 aa18.21■□□□□ 0.51
EXOSC3-203ENST00000465229 GTPBP10A4D1E9 387 aaKnown RBP18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 B4GALT3O60512 393 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 PHACTR2O75167 634 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 LRRN2O75325 713 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 ITGB3P05106 788 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 TRIM21P19474 475 aaKnown RBP18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 CDK17Q00537 523 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 DSC1Q08554 894 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 PAN2Q504Q3 1202 aaKnown RBP18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 HERC6Q8IVU3 1022 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 FBXL13Q8NEE6 735 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 SEMA4DQ92854 862 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 CACNG4Q9UBN1 327 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 ITGA11Q9UKX5 1188 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 ANO9A1A5B4 782 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 HLA-DRAP01903 254 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 LRPAP1P30533 357 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 HTRA4P83105 476 aaPredicted RBP18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 RNASELQ05823 741 aaKnown RBP18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 KCNMA1Q12791 1236 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 CETN1Q12798 172 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 TUSC3Q13454 348 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 NCOA4Q13772 614 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 EPC2Q52LR7 807 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 SYT10Q6XYQ8 523 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 ZNF397Q8NF99 534 aaPredicted RBP18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 LMO3Q8TAP4 145 aa18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 RNPC3Q96LT9 517 aaKnown RBP18.2■□□□□ 0.5
EXOSC3-203ENST00000465229 MRPL9Q9BYD2 267 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms