RNA–Protein interactions for RNA: ENST00000464632.5

APTX-212, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-212ENST00000464632 POLR3FQ9H1D9 316 aaPredicted RBP11.7□□□□□ -0.54
APTX-212ENST00000464632 CXCL16Q9H2A7 254 aa11.7□□□□□ -0.54
APTX-212ENST00000464632 GREB1Q4ZG55 1949 aa11.7□□□□□ -0.54
APTX-212ENST00000464632 TICRRQ7Z2Z1 1910 aa11.7□□□□□ -0.54
APTX-212ENST00000464632 SPEGQ15772 3267 aa11.7□□□□□ -0.54
APTX-212ENST00000464632 CCDC194A0A1B0GVG4 234 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 WDR27A2RRH5 827 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 K7ESF4 209 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 NRG2O14511 850 aaPredicted RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 PRRG1O14668 218 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 N4BP3O15049 544 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 TRAPPC3O43617 180 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 CCNT1O60563 726 aaKnown RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 PRPF40AO75400 957 aaKnown RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 ABLIM3O94929 683 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 PROS1P07225 676 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 IGFBP6P24592 240 aaPredicted RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 CCNE1P24864 410 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 TKTP29401 623 aaKnown RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 ROR1Q01973 937 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 DNM1Q05193 864 aaKnown RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 PTGDRQ13258 359 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 LRRC32Q14392 662 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 SAFBQ15424 915 aaKnown RBP eCLIP11.69□□□□□ -0.54
APTX-212ENST00000464632 FAM187BQ17R55 369 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 AASDHQ4L235 1098 aaPredicted RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 SLC8B1Q6J4K2 584 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 PDZD4Q76G19 769 aaPredicted RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 CEP68Q76N32 757 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 POTEDQ86YR6 584 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 MFSD6LQ8IWD5 586 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 SLFN12Q8IYM2 578 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 FAM160A2Q8N612 972 aaPredicted RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 DEPDC1BQ8WUY9 529 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 SMARCD2Q92925 531 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 CCDC43Q96MW1 224 aaKnown RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 NAP1L4Q99733 375 aaKnown RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 HSD17B14Q9BPX1 270 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 EIF2AK1Q9BQI3 630 aaKnown RBP11.69□□□□□ -0.54
APTX-212ENST00000464632 FZD8Q9H461 694 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 PDZD7Q9H5P4 517 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 TRPV4Q9HBA0 871 aa11.69□□□□□ -0.54
APTX-212ENST00000464632 TRIP11Q15643 1979 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 LRRIQ4A6NIV6 560 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 ZNF263O14978 683 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 MBD3O95983 291 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 CCR2P41597 374 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 RARRES1P49788 294 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 COL9A2Q14055 689 aaPredicted RBP11.68□□□□□ -0.54
APTX-212ENST00000464632 KLHL40Q2TBA0 621 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 CYP4A22Q5TCH4 519 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 CDCA2Q69YH5 1023 aaPredicted RBP11.68□□□□□ -0.54
APTX-212ENST00000464632 HEATR6Q6AI08 1181 aaKnown RBP11.68□□□□□ -0.54
APTX-212ENST00000464632 C1orf228Q6PIY5 440 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 CD300LGQ6UXG3 332 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 NOSTRINQ8IVI9 506 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 ZBTB8OSQ8IWT0 167 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 TCEAL8Q8IYN2 117 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 MSANTD3Q96H12 275 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 ZSWIM3Q96MP5 696 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 UROC1Q96N76 676 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 AIFM3Q96NN9 605 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 CYP4F11Q9HBI6 524 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 KCNJ14Q9UNX9 436 aa11.68□□□□□ -0.54
APTX-212ENST00000464632 DSPP15924 2871 aaKnown RBP11.67□□□□□ -0.54
APTX-212ENST00000464632 ARNTLO00327 626 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 MOSPD3O75425 235 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 SEC24AO95486 1093 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 ZNF806P0C7X5 589 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 XRCC6P12956 609 aaKnown RBP eCLIP11.67□□□□□ -0.54
APTX-212ENST00000464632 ATF2P15336 505 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 U2AF2P26368 475 aaKnown RBP eCLIP11.67□□□□□ -0.549e-15■■■■■ 42.9
APTX-212ENST00000464632 HOXA6P31267 233 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 VIPR2P41587 438 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 BRCC3P46736 316 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 CLCNKBP51801 687 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 GUCY1B3Q02153 619 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 PRPF4BQ13523 1007 aaKnown RBP11.67□□□□□ -0.54
APTX-212ENST00000464632 SF3A2Q15428 464 aaKnown RBP11.67□□□□□ -0.54
APTX-212ENST00000464632 UPP1Q16831 310 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 TMEM132AQ24JP5 1023 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 DGKKQ5KSL6 1271 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 C12orf50Q8NA57 414 aaPredicted RBP11.67□□□□□ -0.54
APTX-212ENST00000464632 CSGALNACT1Q8TDX6 532 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 LOXL4Q96JB6 756 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 PPP1R10Q96QC0 940 aaKnown RBP11.67□□□□□ -0.54
APTX-212ENST00000464632 ADPGKQ9BRR6 497 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 ARRDC1-AS1Q9H2J1 176 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 FOXP1Q9H334 677 aaPredicted RBP11.67□□□□□ -0.54
APTX-212ENST00000464632 C8orf33Q9H7E9 229 aaPredicted RBP11.67□□□□□ -0.54
APTX-212ENST00000464632 GPRC5CQ9NQ84 441 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 RBM12Q9NTZ6 932 aaKnown RBP11.67□□□□□ -0.54
APTX-212ENST00000464632 GDAQ9Y2T3 454 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 INSL5Q9Y5Q6 135 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 WDFY3Q8IZQ1 3526 aa11.67□□□□□ -0.54
APTX-212ENST00000464632 PKD1L2Q7Z442 2459 aa11.66□□□□□ -0.54
APTX-212ENST00000464632 PDCD11Q14690 1871 aaKnown RBP11.66□□□□□ -0.54
APTX-212ENST00000464632 HEPACAM2A8MVW5 462 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms