RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 IL18RAPO95256 599 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 SPATA31D3P0C874 917 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 FGFR3P22607 806 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 LRPAP1P30533 357 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 WNT7BP56706 349 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 POU5F1Q01860 360 aaKnown RBP18.46■□□□□ 0.55
VPS52-215ENST00000464425 PSMD5Q16401 504 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 BMT2Q1RMZ1 405 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 SPATA31D4Q6ZUB0 917 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 HS2ST1Q7LGA3 356 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 BRSK2Q8IWQ3 736 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 GPR65Q8IYL9 337 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 SMRP1Q8NCR6 262 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 PIK3R5Q8WYR1 880 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 FBXL18Q96ME1 805 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 S1PR5Q9H228 398 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 CLSTN2Q9H4D0 955 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 RMND1Q9NWS8 449 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 FAM50BQ9Y247 325 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 DERAQ9Y315 318 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 C2CD2Q9Y426 696 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 PCDHA5Q9Y5H7 936 aa18.46■□□□□ 0.55
VPS52-215ENST00000464425 SPDYE4A6NLX3 237 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 PPEF2O14830 753 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 HOXB8P17481 243 aaPredicted RBP18.45■□□□□ 0.54
VPS52-215ENST00000464425 CYP2J2P51589 502 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 CREMQ03060 361 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 CBWD2Q8IUF1 395 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 EFCAB13Q8IY85 973 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 RDH13Q8NBN7 331 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 SMARCE1Q969G3 411 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 FAM84AQ96KN4 292 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 CLSTN3Q9BQT9 956 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 GTPBP4Q9BZE4 634 aaKnown RBP18.45■□□□□ 0.54
VPS52-215ENST00000464425 DPP3Q9NY33 737 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 FNIP2Q9P278 1114 aa18.45■□□□□ 0.54
VPS52-215ENST00000464425 USP15Q9Y4E8 981 aaPredicted RBP18.45■□□□□ 0.54
VPS52-215ENST00000464425 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.45■□□□□ 0.54
VPS52-215ENST00000464425 TTC28Q96AY4 2481 aa18.44■□□□□ 0.54
VPS52-215ENST00000464425 ZNF233A6NK53 670 aa18.44■□□□□ 0.54
VPS52-215ENST00000464425 KIAA0391O15091 583 aaKnown RBP18.44■□□□□ 0.54
VPS52-215ENST00000464425 ADAM12O43184 909 aa18.44■□□□□ 0.54
VPS52-215ENST00000464425 GLUD1P00367 558 aa18.44■□□□□ 0.54
VPS52-215ENST00000464425 TFAMQ00059 246 aaKnown RBP18.44■□□□□ 0.54
VPS52-215ENST00000464425 SMAD2Q15796 467 aaKnown RBP18.44■□□□□ 0.54
VPS52-215ENST00000464425 RARS2Q5T160 578 aaKnown RBP18.44■□□□□ 0.54
VPS52-215ENST00000464425 C9orf57Q5W0N0 161 aa18.44■□□□□ 0.54
VPS52-215ENST00000464425 PDE11AQ9HCR9 933 aa18.44■□□□□ 0.54
VPS52-215ENST00000464425 MAN1C1Q9NR34 630 aa18.44■□□□□ 0.54
VPS52-215ENST00000464425 CDH22Q9UJ99 828 aa18.44■□□□□ 0.54
VPS52-215ENST00000464425 MAPK8IP1Q9UQF2 711 aa18.44■□□□□ 0.54
VPS52-215ENST00000464425 PDCD11Q14690 1871 aaKnown RBP18.43■□□□□ 0.54
VPS52-215ENST00000464425 TGM5O43548 720 aa18.43■□□□□ 0.54
VPS52-215ENST00000464425 WEE2P0C1S8 567 aa18.43■□□□□ 0.54
VPS52-215ENST00000464425 SNRPFP62306 86 aaKnown RBP18.43■□□□□ 0.54
VPS52-215ENST00000464425 CAMK4Q16566 473 aa18.43■□□□□ 0.54
VPS52-215ENST00000464425 VARS2Q5ST30 1063 aaKnown RBP18.43■□□□□ 0.54
VPS52-215ENST00000464425 PDXDC1Q6P996 788 aa18.43■□□□□ 0.54
VPS52-215ENST00000464425 RSPO2Q6UXX9 243 aaPredicted RBP18.43■□□□□ 0.54
VPS52-215ENST00000464425 TMC5Q6UXY8 1006 aa18.43■□□□□ 0.54
VPS52-215ENST00000464425 FEZF2Q8TBJ5 459 aa18.43■□□□□ 0.54
VPS52-215ENST00000464425 ERCC4Q92889 916 aaPredicted RBP18.43■□□□□ 0.54
VPS52-215ENST00000464425 SUSD3Q96L08 255 aa18.43■□□□□ 0.54
VPS52-215ENST00000464425 NUP62CLQ9H1M0 184 aa18.43■□□□□ 0.54
VPS52-215ENST00000464425 DZANK1Q9NVP4 752 aa18.43■□□□□ 0.54
VPS52-215ENST00000464425 KIAA1468Q9P260 1216 aa18.43■□□□□ 0.54
VPS52-215ENST00000464425 TIMM13Q9Y5L4 95 aaPredicted RBP18.43■□□□□ 0.54
VPS52-215ENST00000464425 PIRO00625 290 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 SYN3O14994 580 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 OR1D2P34982 312 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 SNRNP35Q16560 246 aaKnown RBP18.42■□□□□ 0.54
VPS52-215ENST00000464425 LMBRD2Q68DH5 695 aaPredicted RBP18.42■□□□□ 0.54
VPS52-215ENST00000464425 DSTYKQ6XUX3 929 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 ANKS3Q6ZW76 656 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 XXYLT1Q8NBI6 393 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 ADAM7Q9H2U9 754 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 KIAA1586Q9HCI6 787 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 CGNQ9P2M7 1197 aaKnown RBP18.42■□□□□ 0.54
VPS52-215ENST00000464425 MTRRQ9UBK8 725 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 PCDHB8Q9UN66 801 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 CDY1Q9Y6F8 540 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 VWA8A3KMH1 1905 aa18.42■□□□□ 0.54
VPS52-215ENST00000464425 ANK1P16157 1881 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 C5orf42Q9H799 3197 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 ANO9A1A5B4 782 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 SPTLC1O15269 473 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 ARPP19P56211 112 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 LILRA4P59901 499 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 SKOR2Q2VWA4 1001 aaPredicted RBP18.41■□□□□ 0.54
VPS52-215ENST00000464425 ZNF658Q5TYW1 1059 aaPredicted RBP18.41■□□□□ 0.54
VPS52-215ENST00000464425 SCARA3Q6AZY7 606 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 CES5AQ6NT32 575 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 LILRA6Q6PI73 481 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 NT5DC4Q86YG4 428 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 APPL2Q8NEU8 664 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 GOLGA5Q8TBA6 731 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 CACTINQ8WUQ7 758 aaKnown RBP18.41■□□□□ 0.54
VPS52-215ENST00000464425 SUSD6Q92537 303 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 KCTD10Q9H3F6 313 aa18.41■□□□□ 0.54
VPS52-215ENST00000464425 BACE2Q9Y5Z0 518 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms