RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 IREB2P48200 963 aaKnown RBP21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 TMEM63BQ5T3F8 832 aa21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 ZPBP2Q6X784 338 aa21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 BRSK2Q8IWQ3 736 aa21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 TRAPPC12Q8WVT3 735 aa21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 RNF25Q96BH1 459 aaPredicted RBP21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 PLVAPQ9BX97 442 aa21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 MRPL4Q9BYD3 311 aaKnown RBP21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 MTMR12Q9C0I1 747 aa21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 PABPC3Q9H361 631 aaKnown RBP21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 LRRC19Q9H756 370 aa21.72■■□□□ 1.07
TUBGCP3-204ENST00000464139 ZBTB42B2RXF5 422 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 NOP56O00567 594 aaKnown RBP21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 TRIM66O15016 1216 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 TOM1L1O75674 476 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 TBXAS1P24557 533 aaPredicted RBP21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 FNTAP49354 379 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 PPP1R7Q15435 360 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 LIN9Q5TKA1 542 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 IER5Q5VY09 327 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 C12orf50Q8NA57 414 aaPredicted RBP21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 ZBTB10Q96DT7 871 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 CCDC113Q9H0I3 377 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 SEMA4AQ9H3S1 761 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 CHST7Q9NS84 486 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 NDUFAB1O14561 156 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 GJB1P08034 283 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 MAGOHP61326 146 aaKnown RBP21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 MAMLD1Q13495 774 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 AGBL2Q5U5Z8 902 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 WDR78Q5VTH9 848 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 BBXQ8WY36 941 aaPredicted RBP21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 COPS5Q92905 334 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 DDX27Q96GQ7 796 aaKnown RBP21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 ACO2Q99798 780 aaKnown RBP21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 CNTN6Q9UQ52 1028 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 PASKQ96RG2 1323 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 PAPPA2Q9BXP8 1791 aa21.71■■□□□ 1.07
TUBGCP3-204ENST00000464139 PROSCO94903 275 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 ECEL1O95672 775 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 CD58P19256 250 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 SLC1A1P43005 524 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 EFNA5P52803 228 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 SEC24CP53992 1094 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 MYL6P60660 151 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 FBXO16Q8IX29 292 aaPredicted RBP21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 UHMK1Q8TAS1 419 aaKnown RBP21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 FAM167AQ96KS9 214 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 HEMGNQ9BXL5 484 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 RBPJLQ9UBG7 517 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 USTQ9Y2C2 406 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 PRKCBP05771 671 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 TAS2R40P59535 323 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 SLC29A2Q14542 456 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 SPDYCQ5MJ68 293 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 CELF3Q5SZQ8 465 aaKnown RBP21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 TRIM72Q6ZMU5 477 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 ZNF606Q8WXB4 792 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 IMPG2Q9BZV3 1241 aa21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 MTRF1LQ9UGC7 380 aaKnown RBP21.7■■□□□ 1.06
TUBGCP3-204ENST00000464139 MCM3APO60318 1980 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 CAND2O75155 1236 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 TMOD1P28289 359 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 GJC1P36383 396 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 TTLL12Q14166 644 aaPredicted RBP21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 PTGISQ16647 500 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 ZNF394Q53GI3 561 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 DENND2CQ68D51 928 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 CDR2LQ86X02 465 aaPredicted RBP21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 ERO1BQ86YB8 467 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 RHPN2Q8IUC4 686 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 CCDC50Q8IVM0 306 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 C10orf67Q8IYJ2 551 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 ARFGAP2Q8N6H7 521 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 RUNDC3BQ96NL0 473 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 EPN3Q9H201 632 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 PARP2Q9UGN5 583 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 LRRC37A2A6NM11 1700 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 EBAG9O00559 213 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 ASS1P00966 412 aaKnown RBP21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 POTEJP0CG39 1038 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 FGFR4P22455 802 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 SSR1P43307 286 aaKnown RBP21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 EIF3BP55884 814 aaKnown RBP21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 OSTNP61366 133 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 KRT17Q04695 432 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 PTP4A2Q12974 167 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 PLCB4Q15147 1175 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 MAPK6Q16659 721 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 CDCA2Q69YH5 1023 aaPredicted RBP21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 PHF13Q86YI8 300 aaPredicted RBP21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 WDR49Q8IV35 697 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 ART4Q93070 314 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 SPATA33Q96N06 139 aa21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 R3HDM2Q9Y2K5 976 aaKnown RBP21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.69■■□□□ 1.06
TUBGCP3-204ENST00000464139 SBF1O95248 1867 aa21.68■■□□□ 1.06
TUBGCP3-204ENST00000464139 GBP1P32455 592 aa21.68■■□□□ 1.06
TUBGCP3-204ENST00000464139 ZBTB8OSQ8IWT0 167 aa21.68■■□□□ 1.06
TUBGCP3-204ENST00000464139 SLC12A6Q9UHW9 1150 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms