RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 FUCA2Q9BTY2 467 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 MMTAG2Q9BU76 263 aaKnown RBP14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 FRMD8P1Q9BZ68 369 aaPredicted RBP14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 TMEM117Q9H0C3 514 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 KBTBD4Q9NVX7 518 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 NSMCE4AQ9NXX6 385 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 L3MBTL1Q9Y468 752 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 PIK3R2O00459 728 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 CYP2C8P10632 490 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 TYK2P29597 1187 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 GCKP35557 465 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 TCF7P36402 384 aaPredicted RBP14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 EFHC1Q5JVL4 640 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 PCNX4Q63HM2 1172 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 CCNI2Q6ZMN8 369 aaPredicted RBP14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 COL23A1Q86Y22 540 aaPredicted RBP14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 RIOX1Q9H6W3 641 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 NOP53Q9NZM5 478 aaKnown RBP14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 SLC13A4Q9UKG4 626 aa14.15□□□□□ -0.14
CHRNA4-202ENST00000463705 C3orf70A6NLC5 250 aaPredicted RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 RPLP2P05387 115 aaKnown RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 C6orf222P0C671 652 aaPredicted RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 GPD1P21695 349 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 RFC1P35251 1148 aaPredicted RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 NAMPTP43490 491 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 UGP2Q16851 508 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 FIGNQ5HY92 759 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 AGBL2Q5U5Z8 902 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 KRT80Q6KB66 452 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 TBC1D1Q86TI0 1168 aaPredicted RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 MMGT1Q8N4V1 131 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 DNAJC7Q99615 494 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 NUDT12Q9BQG2 462 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 TRIM54Q9BYV2 358 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 PAK5Q9P286 719 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 PI4K2BG5E9Z4 385 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 HNRNPCL1O60812 293 aaKnown RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 PKN1Q16512 942 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 ULK4Q96C45 1275 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 ASIC4Q96FT7 647 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 PRMT6Q96LA8 375 aaPredicted RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 ZFATQ9P243 1243 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 CFAP73A6NFT4 308 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 CYBBP04839 570 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 FKBP1AP62942 108 aaKnown RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 RUSC1Q9BVN2 902 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 MROH8Q9H579 483 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 PCDHB8Q9UN66 801 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 KIF1AQ12756 1690 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 TADA2AO75478 443 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 RARBP10826 455 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 MAGEA9P43362 315 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 BACE1P56817 501 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 PHEXP78562 749 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 TRADDQ15628 312 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 IMPG1Q17R60 797 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 HP1BP3Q5SSJ5 553 aaPredicted RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 FRMD8Q9BZ67 464 aaPredicted RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 LSM7Q9UK45 103 aaKnown RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 GTF3C4Q9UKN8 822 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 PLAGL2Q9UPG8 496 aa14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.14□□□□□ -0.15
CHRNA4-202ENST00000463705 ZBBXA8MT70 800 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 EEF2KO00418 725 aaKnown RBP14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 GARTP22102 1010 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 NPEPPSP55786 919 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 MYBPC2Q14324 1141 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 PRAMEF18Q5VWM3 479 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 TTC23LQ6PF05 361 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 ATPAF2Q8N5M1 289 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 THOC1Q96FV9 657 aaKnown RBP14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 SPON2Q9BUD6 331 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 FAM205AQ6ZU69 1335 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 CSPG5O95196 566 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 FGFR4P22455 802 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 MORF4L2Q15014 288 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 SAMD7Q7Z3H4 446 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 NOP9Q86U38 636 aaKnown RBP14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 RIBC1Q8N443 379 aaPredicted RBP14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 FEZF2Q8TBJ5 459 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 ACER1Q8TDN7 264 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 TSPAN17Q96FV3 270 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 CCDC138Q96M89 665 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 ROPN1BQ9BZX4 212 aaPredicted RBP14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 WWP1Q9H0M0 922 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 ROPN1Q9HAT0 212 aaPredicted RBP14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 FBXO28Q9NVF7 368 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 HACD3Q9P035 362 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 UBQLN1Q9UMX0 589 aaKnown RBP14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 MTSS1O43312 755 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 CDH16O75309 829 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 MED24O75448 989 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 SUPT20HL2P0C7V6 817 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 IFNA8P32881 189 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 PDK1Q15118 436 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 FAM83AQ86UY5 434 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 ARHGAP18Q8N392 663 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 CCNYL1Q8N7R7 359 aa14.13□□□□□ -0.15
CHRNA4-202ENST00000463705 SNX19Q92543 992 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms