RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RBM12Q9NTZ6 932 aaKnown RBP10.65□□□□□ -0.7
PTPRD-207ENST00000463477 DNAJC12Q9UKB3 198 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 STXBP5LQ9Y2K9 1186 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 TRPV2Q9Y5S1 764 aa10.65□□□□□ -0.7
PTPRD-207ENST00000463477 TANC1Q9C0D5 1861 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 BHMG1C9JSJ3 638 aaPredicted RBP10.64□□□□□ -0.71
PTPRD-207ENST00000463477 EXOC3O60645 756 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 GPR32O75388 356 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 MAFO75444 373 aaPredicted RBP10.64□□□□□ -0.71
PTPRD-207ENST00000463477 RPS6KA5O75582 802 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 GHRP10912 638 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 YWHABP31946 246 aaKnown RBP10.64□□□□□ -0.71
PTPRD-207ENST00000463477 CXCR5P32302 372 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 TNNT3P45378 269 aaPredicted RBP10.64□□□□□ -0.71
PTPRD-207ENST00000463477 WDR5P61964 334 aaKnown RBP10.64□□□□□ -0.71
PTPRD-207ENST00000463477 CETN1Q12798 172 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 DRAP1Q14919 205 aaPredicted RBP10.64□□□□□ -0.71
PTPRD-207ENST00000463477 MTERF2Q49AM1 385 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 CBWD6Q4V339 395 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 CBWD3Q5JTY5 395 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 CBWD5Q5RIA9 395 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 ALS2CLQ60I27 953 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 TSHZ1Q6ZSZ6 1077 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 RASGEF1CQ8N431 466 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 MREGQ8N565 214 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 JPH2Q9BR39 696 aaPredicted RBP10.64□□□□□ -0.71
PTPRD-207ENST00000463477 PBX4Q9BYU1 374 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 GPR88Q9GZN0 384 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 C17orf75Q9HAS0 396 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 CALCOCO1Q9P1Z2 691 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 VPS18Q9P253 973 aa10.64□□□□□ -0.71
PTPRD-207ENST00000463477 SEPT9Q9UHD8 586 aaPredicted RBP10.64□□□□□ -0.71
PTPRD-207ENST00000463477 TTC7AQ9ULT0 858 aaPredicted RBP10.64□□□□□ -0.71
PTPRD-207ENST00000463477 TMEM150BA6NC51 233 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 CCDC188H7C350 402 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 FTCDO95954 541 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 DNAJB2P25686 324 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 ABCD1P33897 745 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 CYP2J2P51589 502 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 CRYBB1P53674 252 aaPredicted RBP10.63□□□□□ -0.71
PTPRD-207ENST00000463477 TMEM62Q0P6H9 643 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 PAK2Q13177 524 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 RAB30Q15771 203 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 EPC2Q52LR7 807 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 GPIHBP1Q8IV16 184 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 DEFB123Q8N688 67 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 XXYLT1Q8NBI6 393 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 LNX1Q8TBB1 728 aaPredicted RBP10.63□□□□□ -0.71
PTPRD-207ENST00000463477 HDAC7Q8WUI4 952 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 RFFLQ8WZ73 363 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 KCNN1Q92952 543 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 PKNOX2Q96KN3 472 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 CEP170P1Q96L14 293 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 DHX33Q9H6R0 707 aaKnown RBP10.63□□□□□ -0.71
PTPRD-207ENST00000463477 AGO3Q9H9G7 860 aaKnown RBP10.63□□□□□ -0.71
PTPRD-207ENST00000463477 CDHR5Q9HBB8 845 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 POLD4Q9HCU8 107 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 MSRAQ9UJ68 235 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 EXOC7Q9UPT5 735 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 FAN1Q9Y2M0 1017 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 PCDHA11Q9Y5I1 949 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 EVPLQ92817 2033 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 RNF40O75150 1001 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 VTNP04004 478 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 PBX2P40425 430 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 CLCN3P51790 818 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 VAMP7P51809 220 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 GALCP54803 685 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 NLRP11P59045 1033 aaKnown RBP10.63□□□□□ -0.71
PTPRD-207ENST00000463477 CLUL1Q15846 466 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 HAUS6Q7Z4H7 955 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 HERC6Q8IVU3 1022 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 LRRC71Q8N4P6 559 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 WHAMMQ8TF30 809 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 SPIRE2Q8WWL2 714 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 TOP1MTQ969P6 601 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 TIFAQ96CG3 184 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 HES6Q96HZ4 224 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 MS4A14Q96JA4 679 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 SH3GL2Q99962 352 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 SH2D3AQ9BRG2 576 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 NTPCRQ9BSD7 190 aaKnown RBP10.63□□□□□ -0.71
PTPRD-207ENST00000463477 FTHL17Q9BXU8 183 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 ADAMTS10Q9H324 1103 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 MTMR10Q9NXD2 777 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 PADI3Q9ULW8 664 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 AKT3Q9Y243 479 aa10.63□□□□□ -0.71
PTPRD-207ENST00000463477 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.62□□□□□ -0.71
PTPRD-207ENST00000463477 ANKRD62A6NC57 917 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 GOLGA6BA6NDN3 693 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 AGPSO00116 658 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 PGRMC1O00264 195 aaKnown RBP10.62□□□□□ -0.71
PTPRD-207ENST00000463477 ENPP3O14638 875 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 GPR182O15218 404 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 GAS2O43903 313 aaKnown RBP10.62□□□□□ -0.71
PTPRD-207ENST00000463477 OPA1O60313 960 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 ZMYND10O75800 440 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 GJB5O95377 273 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 AMHP03971 560 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms