RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 TRPV5Q9NQA5 729 aa22.71■■□□□ 1.23
CPSF7-209ENST00000463244 DDX19AQ9NUU7 478 aaKnown RBP22.71■■□□□ 1.23
CPSF7-209ENST00000463244 LRWD1Q9UFC0 647 aa22.71■■□□□ 1.23
CPSF7-209ENST00000463244 NUB1Q9Y5A7 615 aa22.71■■□□□ 1.23
CPSF7-209ENST00000463244 PRR5-ARHGAP8B1AHC4 643 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 ABLIM1O14639 778 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 MCF2P10911 925 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 PSMC3P17980 439 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 TGM1P22735 817 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 ATXN1P54253 815 aaKnown RBP22.7■■□□□ 1.22
CPSF7-209ENST00000463244 ARHGAP8P85298 464 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 LMNB2Q03252 620 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 DMP1Q13316 513 aaPredicted RBP22.7■■□□□ 1.22
CPSF7-209ENST00000463244 CTXN3Q4LDR2 81 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 CYP4A22Q5TCH4 519 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 VITQ6UXI7 678 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 ELMOD1Q8N336 334 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 C18orf25Q96B23 403 aaPredicted RBP22.7■■□□□ 1.22
CPSF7-209ENST00000463244 SUSD3Q96L08 255 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 ZSWIM3Q96MP5 696 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 IER2Q9BTL4 223 aa22.7■■□□□ 1.22
CPSF7-209ENST00000463244 ZNF334Q9HCZ1 680 aaPredicted RBP22.7■■□□□ 1.22
CPSF7-209ENST00000463244 MEFVO15553 781 aaPredicted RBP22.69■■□□□ 1.22
CPSF7-209ENST00000463244 HIP1RO75146 1068 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 MOSPD3O75425 235 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 TRAPPC10P48553 1259 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 PDIA5Q14554 519 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 IQCEQ6IPM2 695 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 ZNF280DQ6N043 979 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 MPZL3Q6UWV2 235 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 HS6ST3Q8IZP7 471 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 IGSF22Q8N9C0 903 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 SNX29Q8TEQ0 813 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 KMT5AQ9NQR1 393 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 CEP72Q9P209 647 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 AFF4Q9UHB7 1163 aaKnown RBP22.69■■□□□ 1.22
CPSF7-209ENST00000463244 MAFFQ9ULX9 164 aa22.69■■□□□ 1.22
CPSF7-209ENST00000463244 GDI1P31150 447 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 EPHA5P54756 1037 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 NRLP54845 237 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 TWF1Q12792 350 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 LEMD2Q8NC56 503 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 FBXO18Q8NFZ0 1043 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 DEPDC1BQ8WUY9 529 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 ZNF512Q96ME7 567 aaPredicted RBP22.68■■□□□ 1.22
CPSF7-209ENST00000463244 TCHPQ9BT92 498 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 GMEB2Q9UKD1 530 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 CDV3Q9UKY7 258 aaKnown RBP22.68■■□□□ 1.22
CPSF7-209ENST00000463244 USP18Q9UMW8 372 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 RBM19Q9Y4C8 960 aaKnown RBP22.68■■□□□ 1.22
CPSF7-209ENST00000463244 STK24Q9Y6E0 443 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 PIAS3Q9Y6X2 628 aa22.68■■□□□ 1.22
CPSF7-209ENST00000463244 MYH11P35749 1972 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 E9PMD0 336 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 MCM4P33991 863 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 MAPK7Q13164 816 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 NBR1Q14596 966 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 PPP2R5DQ14738 602 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 APPL2Q8NEU8 664 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 FAM3CQ92520 227 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 DDX12PQ92771 950 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 DRC1Q96MC2 740 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 TBC1D32Q96NH3 1257 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 RUSC1Q9BVN2 902 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 TRPV4Q9HBA0 871 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 DNM3Q9UQ16 869 aa22.67■■□□□ 1.22
CPSF7-209ENST00000463244 NCANO14594 1321 aa22.66■■□□□ 1.22
CPSF7-209ENST00000463244 VIPR2P41587 438 aa22.66■■□□□ 1.22
CPSF7-209ENST00000463244 ZSCAN18Q8TBC5 510 aaPredicted RBP22.66■■□□□ 1.22
CPSF7-209ENST00000463244 ZBTB45Q96K62 511 aaPredicted RBP22.66■■□□□ 1.22
CPSF7-209ENST00000463244 C17orf75Q9HAS0 396 aa22.66■■□□□ 1.22
CPSF7-209ENST00000463244 LMAN1LQ9HAT1 526 aa22.66■■□□□ 1.22
CPSF7-209ENST00000463244 PARD6AQ9NPB6 346 aa22.66■■□□□ 1.22
CPSF7-209ENST00000463244 ASAH2Q9NR71 780 aa22.66■■□□□ 1.22
CPSF7-209ENST00000463244 MAP1BP46821 2468 aaKnown RBP22.66■■□□□ 1.22
CPSF7-209ENST00000463244 ARNTLO00327 626 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 HARSP12081 509 aaKnown RBP22.65■■□□□ 1.22
CPSF7-209ENST00000463244 MYL4P12829 197 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 CPB1P15086 417 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 GJA1P17302 382 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 CCR3P51677 355 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 GNL2Q13823 731 aaKnown RBP22.65■■□□□ 1.22
CPSF7-209ENST00000463244 SLC10A6Q3KNW5 377 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 RINT1Q6NUQ1 792 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 RNF19BQ6ZMZ0 732 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 C1orf186Q6ZWK4 172 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 MFSD6LQ8IWD5 586 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 CCDC83Q8IWF9 413 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 CNTNAP3BQ96NU0 1288 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 LLPHQ9BRT6 129 aaKnown RBP22.65■■□□□ 1.22
CPSF7-209ENST00000463244 RTKNQ9BST9 563 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 CNTNAP3Q9BZ76 1288 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 RAB34Q9BZG1 259 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 TUBGCP4Q9UGJ1 667 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 NOL7Q9UMY1 257 aaKnown RBP22.65■■□□□ 1.22
CPSF7-209ENST00000463244 PCDHB8Q9UN66 801 aa22.65■■□□□ 1.22
CPSF7-209ENST00000463244 CNOT1A5YKK6 2376 aaKnown RBP22.64■■□□□ 1.22
CPSF7-209ENST00000463244 ZNF263O14978 683 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 SLC16A4O15374 487 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 TOM1L1O75674 476 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms