RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	CBWD2	Q8IUF1	395 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	BRSK2	Q8IWQ3	736 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	C12orf76	Q8N812	135 aa	Predicted RBP	10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	XXYLT1	Q8NBI6	393 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	CACTIN	Q8WUQ7	758 aa	Known RBP	10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	ASB7	Q9H672	318 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	RMND1	Q9NWS8	449 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	CLEC1B	Q9P126	229 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	FAM50B	Q9Y247	325 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	DERA	Q9Y315	318 aa		10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.41	□□□□□ -0.74
PSMD4-208	ENST00000462970	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	BDP1	A6H8Y1	2624 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	VCAN	P13611	3396 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	KIAA0391	O15091	583 aa	Known RBP	10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	RHOBTB3	O94955	611 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	GLUD1	P00367	558 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	TNNC2	P02585	160 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	ADRB2	P07550	413 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	KRT19	P08727	400 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	WEE2	P0C1S8	567 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	DLAT	P10515	647 aa	Known RBP	10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	IL9	P15248	144 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	CYP3A5	P20815	502 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	FGFR3	P22607	806 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	UBE2H	P62256	183 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	BFSP1	Q12934	665 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	KCNB1	Q14721	858 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	ZBTB6	Q15916	424 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	SNRNP35	Q16560	246 aa	Known RBP	10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	BMT2	Q1RMZ1	405 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	C9orf57	Q5W0N0	161 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	CEP135	Q66GS9	1140 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	PDXDC1	Q6P996	788 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	ELMSAN1	Q6PJG2	1045 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	CD300LG	Q6UXG3	332 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	EFCAB13	Q8IY85	973 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	RNF168	Q8IYW5	571 aa	Predicted RBP	10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	GOLGA5	Q8TBA6	731 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	SLC22A17	Q8WUG5	538 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	PIK3R5	Q8WYR1	880 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	CCDC127	Q96BQ5	260 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	FBXL18	Q96ME1	805 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	TIGD1	Q96MW7	591 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	TSPAN18	Q96SJ8	248 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	UHRF1	Q96T88	793 aa	Predicted RBP	10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	KIAA1586	Q9HCI6	787 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	CHST7	Q9NS84	486 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	TIMM13	Q9Y5L4	95 aa	Predicted RBP	10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	IRAK3	Q9Y616	596 aa		10.4	□□□□□ -0.74
PSMD4-208	ENST00000462970	GRXCR2	A6NFK2	248 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	BIN1	O00499	593 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	MBTPS2	O43462	519 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	CALU	O43852	315 aa	Predicted RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	LILRB3	O75022	631 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	EFEMP2	O95967	443 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	NR3C1	P04150	777 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	ITGB3	P05106	788 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	BMP1	P13497	986 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	TNNI1	P19237	187 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	LRPAP1	P30533	357 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	POLR2B	P30876	1174 aa	Known RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	SSTR3	P32745	418 aa	Predicted RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	OR1D2	P34982	312 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	CLCN4	P51793	760 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	SNRPF	P62306	86 aa	Known RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	SMAD4	Q13485	552 aa	Known RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	COL19A1	Q14993	1142 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	SURF1	Q15526	300 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	CAMK4	Q16566	473 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	PUS10	Q3MIT2	529 aa	Known RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	CTXN3	Q4LDR2	81 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	VARS2	Q5ST30	1063 aa	Known RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	CES5A	Q6NT32	575 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	TMC5	Q6UXY8	1006 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	ANKS3	Q6ZW76	656 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	USP37	Q86T82	979 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	CSGALNACT2	Q8N6G5	542 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	APPL2	Q8NEU8	664 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	LNX1	Q8TBB1	728 aa	Predicted RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	ANKRD36BP1	Q96IX9	119 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	SUSD3	Q96L08	255 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	GBP4	Q96PP9	640 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	FNBP1	Q96RU3	617 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	MTMR12	Q9C0I1	747 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	RXFP1	Q9HBX9	757 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	MAN1C1	Q9NR34	630 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	DZANK1	Q9NVP4	752 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	CGN	Q9P2M7	1197 aa	Known RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	RAPGEFL1	Q9UHV5	662 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	PCDHB8	Q9UN66	801 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	AGAP1	Q9UPQ3	857 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	C2CD2	Q9Y426	696 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	USP15	Q9Y4E8	981 aa	Predicted RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	PCDHA5	Q9Y5H7	936 aa		10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.39	□□□□□ -0.75
PSMD4-208	ENST00000462970	CDY1	Q9Y6F8	540 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms