RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SRPRBQ9Y5M8 271 aaKnown RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 UMODL1Q5DID0 1318 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 RALGAPA2Q2PPJ7 1873 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 ARID1BQ8NFD5 2236 aaPredicted RBP6.4□□□□□ -1.38
VPS36-202ENST00000462289 DDX39AO00148 427 aaKnown RBP6.4□□□□□ -1.38
VPS36-202ENST00000462289 BIN1O00499 593 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 TLR3O15455 904 aaKnown RBP6.4□□□□□ -1.38
VPS36-202ENST00000462289 MAGEB2O15479 319 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 SORBS3O60504 671 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 DKC1O60832 514 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS36-202ENST00000462289 NBNO60934 754 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 PPP6R2O75170 966 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 GPR32O75388 356 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 MAFO75444 373 aaPredicted RBP6.4□□□□□ -1.38
VPS36-202ENST00000462289 CHRNA1P02708 482 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 C8AP07357 584 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 PFKMP08237 780 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 CYP2C9P11712 490 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 NTF4P34130 210 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 LONP1P36776 959 aaKnown RBP6.4□□□□□ -1.38
VPS36-202ENST00000462289 MAGEA10P43363 369 aaPredicted RBP6.4□□□□□ -1.38
VPS36-202ENST00000462289 RARRES1P49788 294 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 EPHB4P54760 987 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 PLCB3Q01970 1234 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 GRIN1Q05586 938 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 POU5F1BQ06416 359 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 RING1Q06587 406 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 BECN1Q14457 450 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 SF3A1Q15459 793 aaKnown RBP6.4□□□□□ -1.38
VPS36-202ENST00000462289 UTP14CQ5TAP6 766 aaKnown RBP6.4□□□□□ -1.38
VPS36-202ENST00000462289 FAM173BQ6P4H8 233 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 RUFY4Q6ZNE9 571 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 CLEC17AQ6ZS10 378 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 FAM214BQ7L5A3 538 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 FERMT3Q86UX7 667 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 C7orf61Q8IZ16 206 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 NME8Q8N427 588 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 FBF1Q8TES7 1133 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 GLG1Q92896 1179 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 ARID3AQ99856 593 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 NFKBIZQ9BYH8 718 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 FTOQ9C0B1 505 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS36-202ENST00000462289 TNKS2Q9H2K2 1166 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 ADAMTS10Q9H324 1103 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 HIPK3Q9H422 1215 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 XPNPEP1Q9NQW7 623 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 CYP26B1Q9NR63 512 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 RCOR1Q9UKL0 485 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 PLAGL2Q9UPG8 496 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 CEP131Q9UPN4 1083 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 ATP11BQ9Y2G3 1177 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 CLIC4Q9Y696 253 aa6.4□□□□□ -1.38
VPS36-202ENST00000462289 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.4□□□□□ -1.38
VPS36-202ENST00000462289 PDCD11Q14690 1871 aaKnown RBP6.4□□□□□ -1.39
VPS36-202ENST00000462289 ATG2AQ2TAZ0 1938 aa6.4□□□□□ -1.39
VPS36-202ENST00000462289 TRIP11Q15643 1979 aa6.4□□□□□ -1.39
VPS36-202ENST00000462289 KIAA1671Q9BY89 1806 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 NLRC5Q86WI3 1866 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 VPS37CA5D8V6 355 aaPredicted RBP6.39□□□□□ -1.39
VPS36-202ENST00000462289 ENC1O14682 589 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 RNASE1P07998 156 aaKnown RBP6.39□□□□□ -1.39
VPS36-202ENST00000462289 BMP6P22004 513 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 KLRC1P26715 233 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 YWHABP31946 246 aaKnown RBP6.39□□□□□ -1.39
VPS36-202ENST00000462289 CYP2C18P33260 490 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 TECP42680 631 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 SP4Q02446 784 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 GRB10Q13322 594 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 BFSP2Q13515 415 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 TCTN1Q2MV58 587 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 NAALADL2Q58DX5 795 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 PLEKHG4Q58EX7 1191 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 TMEM240Q5SV17 173 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 ZNF618Q5T7W0 954 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 HAUS3Q68CZ6 603 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 SCARA3Q6AZY7 606 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 CNNM4Q6P4Q7 775 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 LRRC8DQ7L1W4 858 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 KCNK18Q7Z418 384 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 USP38Q8NB14 1042 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 PPP1R13LQ8WUF5 828 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 TRAPPC12Q8WVT3 735 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 HERVK_113Q902F9 699 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 DYDC2Q96IM9 177 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 HRASLS5Q96KN8 279 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 UIMC1Q96RL1 719 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 TRAIPQ9BWF2 469 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 OSBPL7Q9BZF2 842 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 IL23AQ9NPF7 189 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 BLOC1S4Q9NUP1 217 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 ADAMTS6Q9UKP5 1117 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 PPM1HQ9ULR3 514 aa6.39□□□□□ -1.39
VPS36-202ENST00000462289 BRWD1Q9NSI6 2320 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 TMEM265A0A087WTH1 108 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 TMEM150BA6NC51 233 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 PP2D1A8MPX8 630 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 CHMP2AO43633 222 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 EYA4O95677 639 aa6.38□□□□□ -1.39
VPS36-202ENST00000462289 CSF2RAP15509 400 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms