RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 C16orf59Q7L2K0 433 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 DPH6Q7L8W6 267 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 CACNA2D4Q7Z3S7 1137 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 TMC6Q7Z403 805 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 LRRC43Q8N309 656 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 CXorf38Q8TB03 319 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 HELQQ8TDG4 1101 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 SYN2Q92777 582 aaPredicted RBP11.48□□□□□ -0.57
RTF1-202ENST00000462276 SEMA4DQ92854 862 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 HPDLQ96IR7 371 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 CASD1Q96PB1 797 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 PPP1R9BQ96SB3 815 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 SLC9A7Q96T83 725 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 TMEM175Q9BSA9 504 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 LSM14BQ9BX40 385 aaKnown RBP11.48□□□□□ -0.57
RTF1-202ENST00000462276 STK33Q9BYT3 514 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 XYLT2Q9H1B5 865 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 FAM207AQ9NSI2 230 aaPredicted RBP11.48□□□□□ -0.57
RTF1-202ENST00000462276 RNF19AQ9NV58 838 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 SIX4Q9UIU6 781 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 AGAP1Q9UPQ3 857 aa11.48□□□□□ -0.57
RTF1-202ENST00000462276 MEIS3P2A8K0S8 358 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 AKR1B15C9JRZ8 316 aaPredicted RBP11.47□□□□□ -0.57
RTF1-202ENST00000462276 TMEM189-UBE2V1I3L0A0 370 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 ALDH2P05091 517 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 ACRP10323 421 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 FGFR1P11362 822 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 POLR2BP30876 1174 aaKnown RBP11.47□□□□□ -0.57
RTF1-202ENST00000462276 TAF6P49848 677 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 MYL6P60660 151 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 NOP14P78316 857 aaKnown RBP11.47□□□□□ -0.57
RTF1-202ENST00000462276 NAB2Q15742 525 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 ZNF699Q32M78 642 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 SV2CQ496J9 727 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 ZNF667Q5HYK9 610 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 GLRA4Q5JXX5 417 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 DPY19L2P1Q6NXN4 242 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 OTOP2Q7RTS6 562 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 CMTR2Q8IYT2 770 aaKnown RBP11.47□□□□□ -0.57
RTF1-202ENST00000462276 OR8K1Q8NGG5 319 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 SPATA18Q8TC71 538 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 C18orf25Q96B23 403 aaPredicted RBP11.47□□□□□ -0.57
RTF1-202ENST00000462276 NAA15Q9BXJ9 866 aaKnown RBP11.47□□□□□ -0.57
RTF1-202ENST00000462276 TTYH3Q9C0H2 523 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 NIF3L1Q9GZT8 377 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 GANQ9H2C0 597 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 TBC1D13Q9NVG8 400 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 MIOSQ9NXC5 875 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 GDAP2Q9NXN4 497 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 STK39Q9UEW8 545 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 ZMYND8Q9ULU4 1186 aaPredicted RBP11.47□□□□□ -0.57
RTF1-202ENST00000462276 INPP5FQ9Y2H2 1132 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 SLC4A7Q9Y6M7 1214 aa11.47□□□□□ -0.57
RTF1-202ENST00000462276 TBKBP1A7MCY6 615 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 ZBBXA8MT70 800 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 TRAPPC3O43617 180 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 NRDCO43847 1150 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 NOL4O94818 638 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 POMCP01189 267 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 BPIFB4P59827 614 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 LILRA4P59901 499 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 POLR2FP61218 127 aaKnown RBP11.46□□□□□ -0.57
RTF1-202ENST00000462276 TNNC1P63316 161 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 CUL2Q13617 745 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 ARID5BQ14865 1188 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 UPP1Q16831 310 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 RASIP1Q5U651 963 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 PHLDB3Q6NSJ2 640 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 COLGALT2Q8IYK4 626 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 PPM1KQ8N3J5 372 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 ZNF689Q96CS4 500 aaPredicted RBP11.46□□□□□ -0.57
RTF1-202ENST00000462276 SPAG5Q96R06 1193 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 PANX2Q96RD6 677 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 COLEC11Q9BWP8 271 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 SIX2Q9NPC8 291 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 UBE2TQ9NPD8 197 aaPredicted RBP11.46□□□□□ -0.57
RTF1-202ENST00000462276 ZNHIT6Q9NWK9 470 aaKnown RBP11.46□□□□□ -0.57
RTF1-202ENST00000462276 TUBGCP4Q9UGJ1 667 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 DNAJC12Q9UKB3 198 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 PLAGL2Q9UPG8 496 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 INSL6Q9Y581 213 aa11.46□□□□□ -0.57
RTF1-202ENST00000462276 BZW2Q9Y6E2 419 aaKnown RBP11.46□□□□□ -0.57
RTF1-202ENST00000462276 KPNA7A9QM74 516 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 PODXLO00592 558 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 B3GAT3O94766 335 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 GJB5O95377 273 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 GYPCP04921 128 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 SYN1P17600 705 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 IBSPP21815 317 aaPredicted RBP11.45□□□□□ -0.58
RTF1-202ENST00000462276 HNRNPH3P31942 346 aaKnown RBP11.45□□□□□ -0.58
RTF1-202ENST00000462276 KRT9P35527 623 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 STAT1P42224 750 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 ALDH7A1P49419 539 aaKnown RBP11.45□□□□□ -0.58
RTF1-202ENST00000462276 AARSP49588 968 aaKnown RBP eCLIP11.45□□□□□ -0.58
RTF1-202ENST00000462276 AFF1P51825 1210 aaKnown RBP11.45□□□□□ -0.58
RTF1-202ENST00000462276 HTRA4P83105 476 aaPredicted RBP11.45□□□□□ -0.58
RTF1-202ENST00000462276 CDK17Q00537 523 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 SOX4Q06945 474 aaPredicted RBP11.45□□□□□ -0.58
RTF1-202ENST00000462276 ELAVL2Q12926 359 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms