RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 C1QTNF9P0C862 333 aa6□□□□□ -1.45
COPS3-204ENST00000462236 CCL5P13501 91 aa6□□□□□ -1.45
COPS3-204ENST00000462236 IL1R1P14778 569 aa6□□□□□ -1.45
COPS3-204ENST00000462236 TXKP42681 527 aa6□□□□□ -1.45
COPS3-204ENST00000462236 RAP1GAPP47736 663 aa6□□□□□ -1.45
COPS3-204ENST00000462236 GPR15P49685 360 aa6□□□□□ -1.45
COPS3-204ENST00000462236 MANFP55145 182 aaKnown RBP6□□□□□ -1.45
COPS3-204ENST00000462236 RIPK4P57078 832 aa6□□□□□ -1.45
COPS3-204ENST00000462236 VGLL4Q14135 290 aa6□□□□□ -1.45
COPS3-204ENST00000462236 MYBPC3Q14896 1274 aa6□□□□□ -1.45
COPS3-204ENST00000462236 PRAMEF9Q5VWM5 478 aa6□□□□□ -1.45
COPS3-204ENST00000462236 FERMT2Q96AC1 680 aa6□□□□□ -1.45
COPS3-204ENST00000462236 MTMR8Q96EF0 704 aa6□□□□□ -1.45
COPS3-204ENST00000462236 RAX2Q96IS3 184 aa6□□□□□ -1.45
COPS3-204ENST00000462236 PWWP2AQ96N64 755 aa6□□□□□ -1.45
COPS3-204ENST00000462236 MYL10Q9BUA6 226 aa6□□□□□ -1.45
COPS3-204ENST00000462236 PLA2G12BQ9BX93 195 aa6□□□□□ -1.45
COPS3-204ENST00000462236 TRIM8Q9BZR9 551 aa6□□□□□ -1.45
COPS3-204ENST00000462236 SLC13A1Q9BZW2 595 aa6□□□□□ -1.45
COPS3-204ENST00000462236 PITHD1Q9GZP4 211 aaPredicted RBP6□□□□□ -1.45
COPS3-204ENST00000462236 GREM2Q9H772 168 aa6□□□□□ -1.45
COPS3-204ENST00000462236 C14orf119Q9NWQ9 140 aa6□□□□□ -1.45
COPS3-204ENST00000462236 KCMF1Q9P0J7 381 aa6□□□□□ -1.45
COPS3-204ENST00000462236 NTMQ9P121 344 aa6□□□□□ -1.45
COPS3-204ENST00000462236 TRHDEQ9UKU6 1024 aa6□□□□□ -1.45
COPS3-204ENST00000462236 DENND2AQ9ULE3 1009 aa6□□□□□ -1.45
COPS3-204ENST00000462236 LOC285556D6RIA3 1793 aa6□□□□□ -1.45
COPS3-204ENST00000462236 TCF20Q9UGU0 1960 aaKnown RBP5.99□□□□□ -1.45
COPS3-204ENST00000462236 CLRN2A0PK11 232 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 GOLGA8AA7E2F4 631 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 GOLGA8BA8MQT2 603 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 H0Y858 1186 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 GABRDO14764 452 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 SGPL1O95470 568 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 IGKV5-2P06315 115 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 ZNF853P0CG23 659 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 COL6A1P12109 1028 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 MTHFD2P13995 350 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 ZNF28P17035 718 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 PI3P19957 117 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 ENPP1P22413 925 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 IL13RA1P78552 427 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 CNGB1Q14028 1251 aaPredicted RBP5.99□□□□□ -1.45
COPS3-204ENST00000462236 SSPNQ14714 243 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 KCNA10Q16322 511 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 Q7L0L9 218 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 BMP8AQ7Z5Y6 402 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 CBARPQ8N350 705 aaPredicted RBP5.99□□□□□ -1.45
COPS3-204ENST00000462236 DEFB123Q8N688 67 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 STPG3Q8N7X2 389 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 U2AF1L4Q8WU68 220 aaKnown RBP5.99□□□□□ -1.45
COPS3-204ENST00000462236 DACT3Q96B18 629 aaPredicted RBP5.99□□□□□ -1.45
COPS3-204ENST00000462236 PNNQ9H307 717 aaKnown RBP5.99□□□□□ -1.45
COPS3-204ENST00000462236 POFUT1Q9H488 388 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 VTA1Q9NP79 307 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 SPATA6Q9NWH7 488 aaPredicted RBP5.99□□□□□ -1.45
COPS3-204ENST00000462236 CWC25Q9NXE8 425 aaPredicted RBP5.99□□□□□ -1.45
COPS3-204ENST00000462236 STAP2Q9UGK3 403 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 SYNPO2Q9UMS6 1093 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 RIPOR2Q9Y4F9 1068 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 FAM205AQ6ZU69 1335 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 MAPK8IP3Q9UPT6 1336 aa5.99□□□□□ -1.45
COPS3-204ENST00000462236 CDK5RAP2Q96SN8 1893 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 RPAP1Q9BWH6 1393 aaPredicted RBP5.98□□□□□ -1.45
COPS3-204ENST00000462236 A0A0A6YYJ9 748 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 E2F8A0AVK6 867 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 ELL2O00472 640 aaPredicted RBP5.98□□□□□ -1.45
COPS3-204ENST00000462236 S100BP04271 92 aaPredicted RBP5.98□□□□□ -1.45
COPS3-204ENST00000462236 CSF1RP07333 972 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 PFKMP08237 780 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 CETPP11597 493 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 PSMC4P43686 418 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 GLRBP48167 497 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 RGS3P49796 1198 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 EPHB1P54762 984 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 LINC00310P59036 64 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 MRPS9P82933 396 aaKnown RBP5.98□□□□□ -1.45
COPS3-204ENST00000462236 LMOD3Q0VAK6 560 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 PPIL2Q13356 520 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 SMAD4Q13485 552 aaKnown RBP5.98□□□□□ -1.45
COPS3-204ENST00000462236 KIF22Q14807 665 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 RTP5Q14D33 572 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 PDCD1Q15116 288 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 FAM109BQ6ICB4 259 aaPredicted RBP5.98□□□□□ -1.45
COPS3-204ENST00000462236 LRSAM1Q6UWE0 723 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 ERO1BQ86YB8 467 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 AMOTL1Q8IY63 956 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 CHMP4CQ96CF2 233 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 PAWRQ96IZ0 340 aaKnown RBP5.98□□□□□ -1.45
COPS3-204ENST00000462236 MYD88Q99836 296 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 TACO1Q9BSH4 297 aaKnown RBP5.98□□□□□ -1.45
COPS3-204ENST00000462236 HAPLN2Q9GZV7 340 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 ZNF70Q9UC06 446 aaPredicted RBP5.98□□□□□ -1.45
COPS3-204ENST00000462236 CROTQ9UKG9 612 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 MYPNQ86TC9 1320 aa5.98□□□□□ -1.45
COPS3-204ENST00000462236 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 SNAP23O00161 211 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 ALDH1L1O75891 902 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 RBP3P10745 1247 aa5.97□□□□□ -1.45
COPS3-204ENST00000462236 HOXD10P28358 340 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms