RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 KLHL40Q2TBA0 621 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CT47A1Q5JQC4 288 aaPredicted RBP12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ANKRD40Q6AI12 368 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 KIAA1841Q6NSI8 718 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TTI2Q6NXR4 508 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PDXDC1Q6P996 788 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 FAM186BQ8IYM0 893 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MRPL43Q8N983 215 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TMC2Q8TDI7 906 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PARD3BQ8TEW8 1205 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ZNF560Q96MR9 790 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CDCA3Q99618 268 aaPredicted RBP12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 GPR62Q9BZJ7 368 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MTMR12Q9C0I1 747 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MRPL17Q9NRX2 175 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CTNND2Q9UQB3 1225 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 R3HCC1Q9Y3T6 440 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MYO9BQ13459 2157 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ARHGEF37A1IGU5 675 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 C2orf71A6NGG8 1288 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SYN3O14994 580 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 NCK2O43639 380 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CXCL14O95715 111 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ITGB3P05106 788 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CA8P35219 290 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 AARSP49588 968 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TAF6P49848 677 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CLDN10P78369 228 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CREMQ03060 361 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 BFSP1Q12934 665 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TCEAL5Q5H9L2 206 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 FAM171A1Q5VUB5 890 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 LMBRD2Q68DH5 695 aaPredicted RBP12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SASS6Q6UVJ0 657 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CD300LGQ6UXG3 332 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 LRRC52Q8N7C0 313 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 C1orf127Q8N9H9 656 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MAFAQ8NHW3 353 aaPredicted RBP12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SUSD3Q96L08 255 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CEP63Q96MT8 703 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TTPALQ9BTX7 342 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 GZF1Q9H116 711 aaPredicted RBP12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 RWDD2AQ9UIY3 292 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 COL6A3P12111 3177 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TRIP11Q15643 1979 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ANK1P16157 1881 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PTPRJQ12913 1337 aa12.59□□□□□ -0.39
TRAF3IP1-204ENST00000462122 XIRP2A4UGR9 3374 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 LRRIQ3A6PVS8 624 aaPredicted RBP12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PPEF2O14830 753 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 IKBKBO14920 756 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 FGFR1OPO95684 399 aaKnown RBP12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 FGFR3P22607 806 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 POLR2BP30876 1174 aaKnown RBP12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 BRCC3P46736 316 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 VAMP7P51809 220 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 LILRA4P59901 499 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 MCCD1P59942 119 aaPredicted RBP12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 RBP5P82980 135 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SKOR2Q2VWA4 1001 aaPredicted RBP12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SV2CQ496J9 727 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 KIAA0319Q5VV43 1072 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CAVIN1Q6NZI2 390 aaKnown RBP12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TAS1R1Q7RTX1 841 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TRAPPC11Q7Z392 1133 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 FILIP1Q7Z7B0 1213 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CSGALNACT2Q8N6G5 542 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 APPL2Q8NEU8 664 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 OR5B17Q8NGF7 314 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PIK3R5Q8WYR1 880 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 EMILIN2Q9BXX0 1053 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TLE6Q9H808 572 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 METTL14Q9HCE5 456 aaKnown RBP12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TMEM63CQ9P1W3 806 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 AGAP1Q9UPQ3 857 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PCDHGC5Q9Y5F6 944 aa12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PRRC2BQ5JSZ5 2229 aaKnown RBP12.58□□□□□ -0.4
TRAF3IP1-204ENST00000462122 HIDE1A8MVS5 230 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 M0QZQ0 153 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 C2CD2LO14523 706 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 STX10O60499 249 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 LILRB3O75022 631 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 GNA14O95837 355 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 KRT19P08727 400 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ODC1P11926 461 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 IGFBP6P24592 240 aaPredicted RBP12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ERCC5P28715 1186 aaPredicted RBP12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TKTP29401 623 aaKnown RBP12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 STX17P56962 302 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 MYO1EQ12965 1108 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 DUSP6Q16828 381 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 RTP2Q5QGT7 225 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 DSTYKQ6XUX3 929 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ANKS3Q6ZW76 656 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CEP57Q86XR8 500 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms