RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ASTLQ6HA08 431 aaPredicted RBP20.61■□□□□ 0.89
VARS-220ENST00000461874 SV2BQ7L1I2 683 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 ZNF720Q7Z2F6 126 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 SFR1Q86XK3 245 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 TMEM105Q8N8V8 129 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 SNX21Q969T3 373 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 DNMT3BQ9UBC3 853 aaKnown RBP20.61■□□□□ 0.89
VARS-220ENST00000461874 CPSF3Q9UKF6 684 aaKnown RBP20.61■□□□□ 0.89
VARS-220ENST00000461874 FBXL21Q9UKT6 434 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 STYXL1Q9Y6J8 313 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 ARHGEF37A1IGU5 675 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 M0QZQ0 153 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 XPOTO43592 962 aaKnown RBP20.6■□□□□ 0.89
VARS-220ENST00000461874 ATF2P15336 505 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 ELF1P32519 619 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 NASPP49321 788 aaPredicted RBP20.6■□□□□ 0.89
VARS-220ENST00000461874 CLCN5P51795 746 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 ARPP19P56211 112 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 CTXN3Q4LDR2 81 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 CCDC73Q6ZRK6 1079 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 ALYREFQ86V81 257 aaKnown RBP20.6■□□□□ 0.89
VARS-220ENST00000461874 CD302Q8IX05 232 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 TCEAL8Q8IYN2 117 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 ITFG1Q8TB96 612 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 FGF13Q92913 245 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 DNAJC19Q96DA6 116 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 HCFC1R1Q9NWW0 138 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 WNT16Q9UBV4 365 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 KMT2EQ8IZD2 1858 aa20.6■□□□□ 0.89
VARS-220ENST00000461874 TISP43B9A030 160 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 PRRG1O14668 218 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 PPP1R37O75864 691 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 SRFP11831 508 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 NPR3P17342 541 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 AARSP49588 968 aaKnown RBP eCLIP20.59■□□□□ 0.89
VARS-220ENST00000461874 GUCY2FP51841 1108 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 PABPC1LQ4VXU2 614 aaKnown RBP20.59■□□□□ 0.89
VARS-220ENST00000461874 SPATA1Q5VX52 437 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 TPGS2Q68CL5 300 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 ADALQ6DHV7 355 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 SLFN12LQ6IEE8 588 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 ZNF280DQ6N043 979 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 SIX5Q8N196 739 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 FAM212AQ96EL1 285 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 STRA6Q9BX79 667 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 PANK2Q9BZ23 570 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 SEL1LQ9UBV2 794 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 KCNH3Q9ULD8 1083 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 NUMBLQ9Y6R0 609 aa20.59■□□□□ 0.89
VARS-220ENST00000461874 A0A087X0B3 334 aa20.58■□□□□ 0.89
VARS-220ENST00000461874 GALR2O43603 387 aaPredicted RBP20.58■□□□□ 0.89
VARS-220ENST00000461874 OAZ2O95190 189 aa20.58■□□□□ 0.89
VARS-220ENST00000461874 SEC24AO95486 1093 aa20.58■□□□□ 0.89
VARS-220ENST00000461874 CFHP08603 1231 aa20.58■□□□□ 0.89
VARS-220ENST00000461874 GAP43P17677 238 aa20.58■□□□□ 0.89
VARS-220ENST00000461874 CWF19L1Q69YN2 538 aaKnown RBP20.58■□□□□ 0.89
VARS-220ENST00000461874 JADE1Q6IE81 842 aa20.58■□□□□ 0.89
VARS-220ENST00000461874 LINC00301Q8NCQ3 95 aa20.58■□□□□ 0.89
VARS-220ENST00000461874 FLCNQ8NFG4 579 aa20.58■□□□□ 0.89
VARS-220ENST00000461874 ST13P5Q8NFI4 369 aaPredicted RBP20.58■□□□□ 0.89
VARS-220ENST00000461874 HVCN1Q96D96 273 aa20.58■□□□□ 0.89
VARS-220ENST00000461874 MRPL44Q9H9J2 332 aaKnown RBP20.58■□□□□ 0.89
VARS-220ENST00000461874 CYP4F11Q9HBI6 524 aa20.58■□□□□ 0.89
VARS-220ENST00000461874 AGO2Q9UKV8 859 aaKnown RBP20.58■□□□□ 0.89
VARS-220ENST00000461874 LRG1P02750 347 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 RHOP08100 348 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 STAT6P42226 847 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 ACOT2P49753 483 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 MRE11P49959 708 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 YWHAHQ04917 246 aaPredicted RBP20.57■□□□□ 0.88
VARS-220ENST00000461874 STK38Q15208 465 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 PARM1Q6UWI2 310 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 BEST2Q8NFU1 509 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 FGF14Q92915 247 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 RPP25Q9BUL9 199 aaKnown RBP20.57■□□□□ 0.88
VARS-220ENST00000461874 IKZF4Q9H2S9 585 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 AVENQ9NQS1 362 aaPredicted RBP20.57■□□□□ 0.88
VARS-220ENST00000461874 AFF4Q9UHB7 1163 aaKnown RBP20.57■□□□□ 0.88
VARS-220ENST00000461874 MAFFQ9ULX9 164 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 DERAQ9Y315 318 aa20.57■□□□□ 0.88
VARS-220ENST00000461874 TIMM13Q9Y5L4 95 aaPredicted RBP20.57■□□□□ 0.88
VARS-220ENST00000461874 PDCD11Q14690 1871 aaKnown RBP20.56■□□□□ 0.88
VARS-220ENST00000461874 KRBA1A5PL33 1030 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 PPEF2O14830 753 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 NFICP08651 508 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 PTPN2P17706 415 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 ADSSP30520 456 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 POU5F1Q01860 360 aaKnown RBP20.56■□□□□ 0.88
VARS-220ENST00000461874 TMEM132DQ14C87 1099 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 DSTYKQ6XUX3 929 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 NPAS3Q8IXF0 933 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 PHOX2BQ99453 314 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 OXCT2Q9BYC2 517 aaPredicted RBP20.56■□□□□ 0.88
VARS-220ENST00000461874 IRF2BPLQ9H1B7 796 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 ASB7Q9H672 318 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 SLC2A4RGQ9NR83 387 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 TBC1D7Q9P0N9 293 aa20.56■□□□□ 0.88
VARS-220ENST00000461874 TFIP11Q9UBB9 837 aaKnown RBP20.56■□□□□ 0.88
VARS-220ENST00000461874 MRPS23Q9Y3D9 190 aaKnown RBP20.56■□□□□ 0.88
VARS-220ENST00000461874 INSL5Q9Y5Q6 135 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms