RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 CACNB2Q08289 660 aaPredicted RBP4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 SMC1AQ14683 1233 aaKnown RBP4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 ELF2Q15723 593 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 KCNA10Q16322 511 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 FAM187BQ17R55 369 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 GLRA4Q5JXX5 417 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 SLC20A1Q8WUM9 679 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 PGBD4Q96DM1 585 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 CALR3Q96L12 384 aaKnown RBP4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 RHOXF2Q9BQY4 288 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 KATNBL1Q9H079 304 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 MINDY3Q9H8M7 445 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 SIX2Q9NPC8 291 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 SLC38A7Q9NVC3 462 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 KLK14Q9P0G3 267 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 ITGA11Q9UKX5 1188 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 MTUS1Q9ULD2 1270 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 USTQ9Y2C2 406 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 COQ4Q9Y3A0 265 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 SCINQ9Y6U3 715 aa4.4□□□□□ -1.71
ATP13A3-206ENST00000461660 ZBTB42B2RXF5 422 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 GOLGA8SH3BPF8 625 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ASS1P00966 412 aaKnown RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 CALB1P05937 261 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 MYBL1P10243 752 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 PNPLA4P41247 253 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ARHGAP25P42331 645 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 VEGFBP49765 207 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 RNASE9P60153 205 aaKnown RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF200P98182 395 aaPredicted RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 RNASELQ05823 741 aaKnown RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ITGA7Q13683 1181 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 CLUL1Q15846 466 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 HGSNATQ68CP4 663 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 JADE1Q6IE81 842 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 DSTYKQ6XUX3 929 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 IRF2BP2Q7Z5L9 587 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 SLC47A2Q86VL8 602 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ERICH1Q86X53 443 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 CCDC50Q8IVM0 306 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 FAM71AQ8IYT1 594 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 GOLGA6L1Q8N7Z2 621 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 PLEKHO2Q8TD55 490 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ELMO3Q96BJ8 720 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 CCDC113Q9H0I3 377 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 PLEKHA5Q9HAU0 1116 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 CYP3A43Q9HB55 503 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 CISHQ9NSE2 258 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 LRFN2Q9ULH4 789 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 REXO2Q9Y3B8 237 aaKnown RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 C2CD2Q9Y426 696 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 C4BPAP04003 597 aaKnown RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ATP1A1P05023 1023 aaKnown RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 GZMAP12544 262 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 SKIP12755 728 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 CTNNA2P26232 953 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 CXCR5P32302 372 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 JAM2P57087 298 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 HLTFQ14527 1009 aaKnown RBP eCLIP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ERCC6LQ2NKX8 1250 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 SGO2Q562F6 1265 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 C8orf74Q6P047 294 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 GLB1LQ6UWU2 654 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 RUFY4Q6ZNE9 571 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 METTL23Q86XA0 190 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 IFNLR1Q8IU57 520 aaPredicted RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF784Q8NCA9 323 aaPredicted RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 SLC30A5Q8TAD4 765 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF564Q8TBZ8 553 aaPredicted RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 EPS8L1Q8TE68 723 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 USP6NLQ92738 828 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 KREMEN1Q96MU8 473 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 RUFY1Q96T51 708 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 MED10Q9BTT4 135 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 PACSIN1Q9BY11 444 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 RNF208Q9H0X6 261 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 RNF14Q9UBS8 474 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ANAPC7Q9UJX3 599 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 GTF3C4Q9UKN8 822 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 HES2Q9Y543 173 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 DUSP10Q9Y6W6 482 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 A0A1B0GUA9 196 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 A8MXQ7 604 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 MIF4GDA9UHW6 222 aaKnown RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 M0QYV0 167 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 PJA2O43164 708 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 MMEP08473 750 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 HOXD8P13378 290 aaPredicted RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 AKAP5P24588 427 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 CCND3P30281 292 aaPredicted RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 TAF6P49848 677 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 RAB27AP51159 221 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 GUCY2FP51841 1108 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 IRX5P78411 483 aaPredicted RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 POU5F1Q01860 360 aaKnown RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 BFSP2Q13515 415 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 STILQ15468 1287 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 SV2CQ496J9 727 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms