RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SERHLQ9NQF3 203 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 C11orf21Q9P2W6 132 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 RGS17Q9UGC6 210 aaPredicted RBP3.74□□□□□ -1.81
HDAC6-212ENST00000461608 DMTF1Q9Y222 760 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 MED16Q9Y2X0 877 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 PCDHGB6Q9Y5F9 930 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 PCDHA3Q9Y5H8 950 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 SNX13Q9Y5W8 968 aa3.74□□□□□ -1.81
HDAC6-212ENST00000461608 F2RL2O00254 374 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 CNOT4O95628 575 aaKnown RBP3.73□□□□□ -1.81
HDAC6-212ENST00000461608 CHEK2O96017 543 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 PLATP00750 562 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 THP07101 528 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 BRAFP15056 766 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 PCSK1P29120 753 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 SLC7A1P30825 629 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 CASRP41180 1078 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 ALDH1A3P47895 512 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 CASP5P51878 434 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 SNAPC2Q13487 334 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 TBR1Q16650 682 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 KHDC1LQ5JSQ8 128 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 AFMIDQ63HM1 303 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 SLFN13Q68D06 897 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 ZNF783Q6ZMS7 281 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 TSHZ1Q6ZSZ6 1077 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 APBB1IPQ7Z5R6 666 aaPredicted RBP3.73□□□□□ -1.81
HDAC6-212ENST00000461608 ADGRE4PQ86SQ3 457 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 FAM83AQ86UY5 434 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 ZGPATQ8N5A5 531 aaKnown RBP3.73□□□□□ -1.81
HDAC6-212ENST00000461608 OR6B3Q8NGW1 331 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 PLBD2Q8NHP8 589 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 ZFP28Q8NHY6 868 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 IL31RAQ8NI17 732 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 MDM1Q8TC05 714 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 NEIL1Q96FI4 390 aaPredicted RBP3.73□□□□□ -1.81
HDAC6-212ENST00000461608 RPL10LQ96L21 214 aaKnown RBP3.73□□□□□ -1.81
HDAC6-212ENST00000461608 SGCZQ96LD1 299 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 CCDC138Q96M89 665 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 GPHA2Q96T91 129 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 MPHOSPH9Q99550 1183 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 EIF2AQ9BY44 585 aaKnown RBP3.73□□□□□ -1.81
HDAC6-212ENST00000461608 EPC1Q9H2F5 836 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 MRPL46Q9H2W6 279 aaKnown RBP3.73□□□□□ -1.81
HDAC6-212ENST00000461608 ATP6V0A4Q9HBG4 840 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 ZNF287Q9HBT7 754 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 JKAMPQ9P055 326 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 NCDNQ9UBB6 729 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 AFF4Q9UHB7 1163 aaKnown RBP3.73□□□□□ -1.81
HDAC6-212ENST00000461608 TAGLN3Q9UI15 199 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 ACTL7AQ9Y615 435 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 ATRNL1Q5VV63 1379 aa3.73□□□□□ -1.81
HDAC6-212ENST00000461608 ABHD14A-ACY1A0A1B0GW23 586 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 LRRC14BA6NHZ5 514 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 CXorf49A8MYA2 514 aaPredicted RBP3.72□□□□□ -1.81
HDAC6-212ENST00000461608 B4GALT3O60512 393 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 CDC14BO60729 498 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 IL18RAPO95256 599 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 FOSP01100 380 aaPredicted RBP3.72□□□□□ -1.81
HDAC6-212ENST00000461608 RARBP10826 455 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 NPR1P16066 1061 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 GNAT2P19087 354 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 CR2P20023 1033 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 EPHB4P54760 987 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 SOX8P57073 446 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 CLRN1P58418 232 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 POU6F2P78424 691 aaPredicted RBP3.72□□□□□ -1.81
HDAC6-212ENST00000461608 RAB32Q13637 225 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 DAG1Q14118 895 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 KIF22Q14807 665 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 CNGA2Q16280 664 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 SMN1Q16637 294 aaKnown RBP3.72□□□□□ -1.81
HDAC6-212ENST00000461608 CCDC93Q567U6 631 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 PRR16Q569H4 304 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 DCAF17Q5H9S7 520 aaPredicted RBP3.72□□□□□ -1.81
HDAC6-212ENST00000461608 CRIP3Q6Q6R5 217 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 ZNF365Q70YC5 407 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 SPRED1Q7Z699 444 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 CERS3Q8IU89 383 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 DCBLD1Q8N8Z6 715 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 FANCBQ8NB91 859 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 REPS2Q8NFH8 660 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 IPCEF1Q8WWN9 437 aaPredicted RBP3.72□□□□□ -1.81
HDAC6-212ENST00000461608 NMD3Q96D46 503 aaKnown RBP3.72□□□□□ -1.81
HDAC6-212ENST00000461608 LMF1Q96S06 567 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 MRI1Q9BV20 369 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 TRIM54Q9BYV2 358 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 DPH1Q9BZG8 443 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 BRD9Q9H8M2 597 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 ARMT1Q9H993 441 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 TSC22D4Q9Y3Q8 395 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 HS3ST3A1Q9Y663 406 aa3.72□□□□□ -1.81
HDAC6-212ENST00000461608 WDR33Q9C0J8 1336 aaKnown RBP3.71□□□□□ -1.81
HDAC6-212ENST00000461608 UBE2QL1A1L167 161 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 MBD3L4A6NDZ8 208 aaPredicted RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 MBD3L3A6NE82 208 aaPredicted RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 PRR5-ARHGAP8B1AHC4 643 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 MATN2O00339 956 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 GRM6O15303 877 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 LAMTOR5O43504 91 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms